Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.08□□□□□ -1.92
Limch1Q3UH68 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Limch1Q3UH68 Gm24171-201ENSMUST00000104126 131 ntBASIC3.07□□□□□ -1.92
Limch1Q3UH68 Gm25711-201ENSMUST00000158633 128 ntBASIC3.07□□□□□ -1.92
Limch1Q3UH68 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Limch1Q3UH68 Gm25588-201ENSMUST00000082501 140 ntBASIC3.07□□□□□ -1.92
Limch1Q3UH68 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Limch1Q3UH68 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Limch1Q3UH68 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm2830-201ENSMUST00000140330 385 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm26411-201ENSMUST00000157668 107 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Mir5118-201ENSMUST00000175551 67 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm22070-201ENSMUST00000178475 107 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Limch1Q3UH68 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm27527-201ENSMUST00000183903 99 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm6060-201ENSMUST00000188671 251 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm37807-201ENSMUST00000194310 190 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm35736-201ENSMUST00000203681 313 ntBASIC3.06□□□□□ -1.92
Limch1Q3UH68 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Limch1Q3UH68 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm24274-201ENSMUST00000116787 124 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm24632-201ENSMUST00000122770 323 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm22790-201ENSMUST00000157229 129 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm24718-201ENSMUST00000157521 136 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm23113-201ENSMUST00000158477 99 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm25364-201ENSMUST00000158851 107 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Mir8103-201ENSMUST00000183945 107 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm44903-201ENSMUST00000206840 130 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Limch1Q3UH68 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.05□□□□□ -1.92
Limch1Q3UH68 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.05□□□□□ -1.92
Limch1Q3UH68 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.04□□□□□ -1.92
Limch1Q3UH68 Gm25377-201ENSMUST00000104334 129 ntBASIC3.04□□□□□ -1.92
Limch1Q3UH68 Gm26105-201ENSMUST00000157253 190 ntBASIC3.04□□□□□ -1.92
Limch1Q3UH68 Rnu7-201ENSMUST00000158458 62 ntBASIC3.04□□□□□ -1.92
Limch1Q3UH68 Gm24842-201ENSMUST00000158681 54 ntBASIC3.04□□□□□ -1.92
Limch1Q3UH68 Gm27792-201ENSMUST00000184031 115 ntBASIC3.04□□□□□ -1.92
Limch1Q3UH68 Mir29c-201ENSMUST00000083614 88 ntBASIC3.04□□□□□ -1.92
Limch1Q3UH68 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Limch1Q3UH68 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Mir682-201ENSMUST00000102281 96 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm26341-201ENSMUST00000104561 134 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm13756-201ENSMUST00000117618 222 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm22664-201ENSMUST00000158719 105 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm25069-201ENSMUST00000175238 86 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm22306-201ENSMUST00000082692 107 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm26494-201ENSMUST00000083154 143 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Gm24493-201ENSMUST00000083805 143 ntBASIC3.03□□□□□ -1.92
Limch1Q3UH68 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Limch1Q3UH68 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Gm26342-201ENSMUST00000104557 129 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Gm13588-201ENSMUST00000120026 135 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Gm24559-201ENSMUST00000157519 121 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Limch1Q3UH68 Gm44464-201ENSMUST00000198010 138 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Gm22622-201ENSMUST00000082870 129 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 Snord118-201ENSMUST00000082965 135 ntBASIC3.02□□□□□ -1.93
Limch1Q3UH68 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Limch1Q3UH68 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Limch1Q3UH68 Mir293-201ENSMUST00000104841 80 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm14568-201ENSMUST00000119321 294 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm14843-201ENSMUST00000119596 212 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm16355-201ENSMUST00000128606 231 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm23859-201ENSMUST00000158383 64 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm23509-201ENSMUST00000083080 160 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm22055-201ENSMUST00000083388 107 ntBASIC3.01□□□□□ -1.93
Limch1Q3UH68 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Limch1Q3UH68 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Limch1Q3UH68 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Limch1Q3UH68 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Limch1Q3UH68 Gm13136-201ENSMUST00000121031 2950 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Limch1Q3UH68 Gm22004-201ENSMUST00000101884 107 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Mir92-1-201ENSMUST00000102108 80 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm25485-201ENSMUST00000104120 132 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm44489-201ENSMUST00000104619 97 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm15289-201ENSMUST00000117793 244 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm14602-201ENSMUST00000118625 340 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm23983-201ENSMUST00000157142 114 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm23600-201ENSMUST00000157260 71 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm24246-201ENSMUST00000157315 132 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm24436-201ENSMUST00000157889 302 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm42807-201ENSMUST00000200141 329 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm37331-201ENSMUST00000192367 3375 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3□□□□□ -1.93
Limch1Q3UH68 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3□□□□□ -1.93
Limch1Q3UH68 Gm26074-201ENSMUST00000104063 129 ntBASIC2.99□□□□□ -1.93
Limch1Q3UH68 Gm23907-201ENSMUST00000104595 189 ntBASIC2.99□□□□□ -1.93
Limch1Q3UH68 Gm25529-201ENSMUST00000104850 92 ntBASIC2.99□□□□□ -1.93
Limch1Q3UH68 Gm7209-201ENSMUST00000122339 333 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms