Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm13059-201ENSMUST00000119881 398 ntBASIC0.04□□□□□ -2.4
Cdx2P43241 Scarna8-201ENSMUST00000158333 131 ntBASIC0.04□□□□□ -2.4
Cdx2P43241 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.04□□□□□ -2.4
Cdx2P43241 Gm20462-201ENSMUST00000172623 408 ntBASIC0.04□□□□□ -2.4
Cdx2P43241 Gm5023-201ENSMUST00000217442 587 ntBASIC0.04□□□□□ -2.4
Cdx2P43241 Gm15289-201ENSMUST00000117793 244 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Gm23016-201ENSMUST00000158431 62 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Gm24500-201ENSMUST00000158447 124 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Gm26022-201ENSMUST00000158663 108 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Gm24880-201ENSMUST00000158776 85 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Mir1933-201ENSMUST00000158930 88 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Gm44345-201ENSMUST00000199560 135 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Gm24527-201ENSMUST00000082920 107 ntBASIC0.03□□□□□ -2.4
Cdx2P43241 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Cdx2P43241 Gm25558-201ENSMUST00000158083 106 ntBASIC0.02□□□□□ -2.41
Cdx2P43241 Gm22239-201ENSMUST00000175220 103 ntBASIC0.02□□□□□ -2.41
Cdx2P43241 Gm23416-201ENSMUST00000175520 95 ntBASIC0.02□□□□□ -2.41
Cdx2P43241 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Cdx2P43241 Gm42623-201ENSMUST00000197225 379 ntBASIC0.02□□□□□ -2.41
Cdx2P43241 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Cdx2P43241 Gm22283-201ENSMUST00000082556 161 ntBASIC0.02□□□□□ -2.41
Cdx2P43241 Snord95-201ENSMUST00000082846 68 ntBASIC0.02□□□□□ -2.41
Cdx2P43241 Mir767-201ENSMUST00000103256 107 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm13711-201ENSMUST00000119708 453 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm13560-201ENSMUST00000121865 329 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm22215-201ENSMUST00000157558 96 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm23584-201ENSMUST00000157655 129 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm24015-201ENSMUST00000157725 232 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm23113-201ENSMUST00000158477 99 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm11392-201ENSMUST00000181419 710 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm45543-201ENSMUST00000209327 88 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm19572-201ENSMUST00000214326 338 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm23851-201ENSMUST00000083831 103 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm26108-201ENSMUST00000083973 191 ntBASIC0.01□□□□□ -2.41
Cdx2P43241 Gm16186-201ENSMUST00000120132 216 ntBASIC0□□□□□ -2.41
Cdx2P43241 n-R5s6-201ENSMUST00000122663 88 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0□□□□□ -2.41
Cdx2P43241 Mir1951-201ENSMUST00000157981 89 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm22520-201ENSMUST00000158269 129 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm23182-201ENSMUST00000158688 135 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm24818-201ENSMUST00000175093 161 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm22801-201ENSMUST00000175624 84 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0□□□□□ -2.41
Cdx2P43241 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0□□□□□ -2.41
Cdx2P43241 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0□□□□□ -2.41
Cdx2P43241 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0□□□□□ -2.41
Cdx2P43241 Gm44063-201ENSMUST00000203307 376 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm45119-201ENSMUST00000207612 199 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm45402-201ENSMUST00000211796 223 ntBASIC0□□□□□ -2.41
Cdx2P43241 Gm18113-201ENSMUST00000220630 303 ntBASIC0□□□□□ -2.41
Cdx2P43241 Snord69-201ENSMUST00000104024 80 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Cdx2P43241 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.01□□□□□ -2.41
Cdx2P43241 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm26180-201ENSMUST00000179942 107 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Gm26164-201ENSMUST00000083793 104 ntBASIC-0.02□□□□□ -2.41
Cdx2P43241 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm22771-201ENSMUST00000104449 91 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.03□□□□□ -2.41
Cdx2P43241 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.04□□□□□ -2.42
Cdx2P43241 Gm44473-201ENSMUST00000204039 152 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 188 ms