Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm23043-201ENSMUST00000157890 109 ntBASIC2.42□□□□□ -2.02
Hoxd4P10628 Gm24082-201ENSMUST00000175175 83 ntBASIC2.42□□□□□ -2.02
Hoxd4P10628 Gm22129-201ENSMUST00000179034 107 ntBASIC2.42□□□□□ -2.02
Hoxd4P10628 Gm25130-201ENSMUST00000082650 156 ntBASIC2.42□□□□□ -2.02
Hoxd4P10628 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Hoxd4P10628 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm22451-201ENSMUST00000122803 151 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm24946-201ENSMUST00000158332 106 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm25978-201ENSMUST00000158698 90 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm44057-201ENSMUST00000204547 96 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm30534-201ENSMUST00000217928 207 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm26458-201ENSMUST00000082832 128 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Mir489-201ENSMUST00000093599 107 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.41□□□□□ -2.02
Hoxd4P10628 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Hoxd4P10628 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Hoxd4P10628 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Hoxd4P10628 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Hoxd4P10628 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Hoxd4P10628 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm25466-201ENSMUST00000103995 132 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm26076-201ENSMUST00000104065 105 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm24280-201ENSMUST00000104237 134 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm24375-201ENSMUST00000104397 132 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm16021-201ENSMUST00000121176 219 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm23980-201ENSMUST00000157135 158 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm22796-201ENSMUST00000157234 106 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm24443-201ENSMUST00000157242 132 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm24958-201ENSMUST00000158009 97 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm22770-201ENSMUST00000158368 67 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm24681-201ENSMUST00000158760 107 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm22638-201ENSMUST00000179674 107 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Mir6402-201ENSMUST00000183406 80 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Mir6917-201ENSMUST00000184111 61 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Mir6916-201ENSMUST00000184514 63 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm43626-201ENSMUST00000198575 162 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm19563-201ENSMUST00000222031 270 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Gm25513-201ENSMUST00000083861 162 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Hoxd4P10628 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Hoxd4P10628 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.4□□□□□ -2.03
Hoxd4P10628 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Snord78-201ENSMUST00000104032 66 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm22678-201ENSMUST00000116974 101 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm15466-201ENSMUST00000122299 333 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm24559-201ENSMUST00000157519 121 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Mir3092-201ENSMUST00000174954 96 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm44464-201ENSMUST00000198010 138 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm44399-201ENSMUST00000205043 226 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.39□□□□□ -2.03
Hoxd4P10628 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm22306-201ENSMUST00000082692 107 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm23040-201ENSMUST00000083869 163 ntBASIC2.39□□□□□ -2.03
Hoxd4P10628 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Hoxd4P10628 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Hoxd4P10628 Gm22772-201ENSMUST00000104451 121 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm13246-201ENSMUST00000120994 315 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm14709-201ENSMUST00000121225 304 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm22067-201ENSMUST00000122790 107 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm24913-201ENSMUST00000157286 107 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm24977-201ENSMUST00000083106 163 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm22972-201ENSMUST00000083297 131 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm23247-201ENSMUST00000083373 107 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Hoxd4P10628 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Hoxd4P10628 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.38□□□□□ -2.03
Hoxd4P10628 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm25112-201ENSMUST00000122680 104 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm23223-201ENSMUST00000158119 127 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Mir3094-201ENSMUST00000175121 64 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm20718-201ENSMUST00000176058 259 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm25933-201ENSMUST00000178943 108 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm27698-201ENSMUST00000184060 249 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.37□□□□□ -2.03
Hoxd4P10628 Gm44666-201ENSMUST00000208544 391 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Mir155-201ENSMUST00000083463 65 ntBASIC2.37□□□□□ -2.03
Hoxd4P10628 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Hoxd4P10628 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Hoxd4P10628 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Hoxd4P10628 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Hoxd4P10628 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Hoxd4P10628 Mir542-201ENSMUST00000102186 85 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 Gm25610-201ENSMUST00000104016 129 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 Gm26214-201ENSMUST00000158581 107 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 Gm27532-201ENSMUST00000183726 113 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 Gm27582-201ENSMUST00000184084 126 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 Gm44459-201ENSMUST00000203926 160 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.36□□□□□ -2.03
Hoxd4P10628 Snord104-201ENSMUST00000083192 70 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms