Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23532-201ENSMUST00000104569 112 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 Gm17117-201ENSMUST00000163665 299 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 Gm26073-201ENSMUST00000179906 127 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.62□□□□□ -1.99
Hoxd3P09027 AC167669.1-201ENSMUST00000224932 384 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 Gm23056-201ENSMUST00000082803 111 ntBASIC2.62□□□□□ -1.99
Hoxd3P09027 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Hoxd3P09027 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.62□□□□□ -1.99
Hoxd3P09027 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hoxd3P09027 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
Hoxd3P09027 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxd3P09027 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.61□□□□□ -1.99
Hoxd3P09027 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Hoxd3P09027 Gm16584-201ENSMUST00000159267 189 ntBASIC2.61□□□□□ -1.99
Hoxd3P09027 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxd3P09027 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxd3P09027 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.61□□□□□ -1.99
Hoxd3P09027 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Hoxd3P09027 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Hoxd3P09027 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Hoxd3P09027 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Hoxd3P09027 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hoxd3P09027 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.6□□□□□ -1.99
Hoxd3P09027 Gm23468-201ENSMUST00000157125 108 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 Gm26100-201ENSMUST00000157245 127 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 Gm24238-201ENSMUST00000157792 98 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 Gm9765-201ENSMUST00000043170 321 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 Snord80-201ENSMUST00000083801 81 ntBASIC2.6□□□□□ -1.99
Hoxd3P09027 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Hoxd3P09027 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm13433-201ENSMUST00000121701 240 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm26105-201ENSMUST00000157253 190 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm23065-201ENSMUST00000158236 130 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Mir5619-201ENSMUST00000176065 61 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Mir7578-201ENSMUST00000183455 82 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm27991-201ENSMUST00000184804 137 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm42807-201ENSMUST00000200141 329 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm45386-201ENSMUST00000210194 218 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Gm23293-201ENSMUST00000082552 104 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 AF357428-201ENSMUST00000083815 69 ntBASIC2.59□□□□□ -1.99
Hoxd3P09027 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hoxd3P09027 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hoxd3P09027 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Hoxd3P09027 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hoxd3P09027 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
Hoxd3P09027 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hoxd3P09027 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hoxd3P09027 Gm22956-201ENSMUST00000122520 80 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm23791-201ENSMUST00000122553 293 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.58□□□□□ -2
Hoxd3P09027 Gm25329-201ENSMUST00000158041 126 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm24730-201ENSMUST00000158228 117 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm23917-201ENSMUST00000175256 98 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm24674-201ENSMUST00000179194 104 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm27374-201ENSMUST00000183660 81 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hoxd3P09027 Gm45268-201ENSMUST00000210046 370 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Hoxd3P09027 Gm25855-201ENSMUST00000082787 72 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Gm24527-201ENSMUST00000082920 107 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Snora70-201ENSMUST00000083047 137 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Mir301-201ENSMUST00000083655 86 ntBASIC2.58□□□□□ -2
Hoxd3P09027 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Hoxd3P09027 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hoxd3P09027 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Hoxd3P09027 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Hoxd3P09027 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.58□□□□□ -2
Hoxd3P09027 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hoxd3P09027 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hoxd3P09027 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
Hoxd3P09027 Mir802-201ENSMUST00000103258 97 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm23175-201ENSMUST00000104371 132 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm23671-201ENSMUST00000157472 103 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm24000-201ENSMUST00000158063 89 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm24637-201ENSMUST00000158674 85 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.57□□□□□ -2
Hoxd3P09027 Mir6353-201ENSMUST00000183596 113 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Mir21c-201ENSMUST00000184910 78 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm42795-201ENSMUST00000198847 76 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.57□□□□□ -2
Hoxd3P09027 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Snora20-201ENSMUST00000082703 128 ntBASIC2.57□□□□□ -2
Hoxd3P09027 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxd3P09027 Gm24118-201ENSMUST00000103972 126 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Mir669d-201ENSMUST00000104644 121 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm23715-201ENSMUST00000157354 106 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm23390-201ENSMUST00000157393 106 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm22338-201ENSMUST00000157715 129 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Mir1950-201ENSMUST00000158526 74 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm25711-201ENSMUST00000158633 128 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Mir5127-201ENSMUST00000175295 71 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm25950-201ENSMUST00000175331 100 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm24801-201ENSMUST00000178503 105 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm26441-201ENSMUST00000082590 104 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms