Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm24345-201ENSMUST00000158706 124 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm24880-201ENSMUST00000158776 85 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm26073-201ENSMUST00000179906 127 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm24415-201ENSMUST00000180218 107 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm29014-201ENSMUST00000191422 326 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Sdc4O35988 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Sdc4O35988 Snord69-201ENSMUST00000104024 80 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm23708-201ENSMUST00000104367 123 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm13059-201ENSMUST00000119881 398 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm16186-201ENSMUST00000120132 216 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm11407-201ENSMUST00000120362 1058 ntBASIC0□□□□□ -2.41
Sdc4O35988 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm24440-201ENSMUST00000157236 63 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm23278-201ENSMUST00000157911 143 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm23763-201ENSMUST00000158345 60 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm24512-201ENSMUST00000174963 65 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm25314-201ENSMUST00000178810 79 ntBASIC0□□□□□ -2.41
Sdc4O35988 Mir376a-201ENSMUST00000197584 68 ntBASIC0□□□□□ -2.41
Sdc4O35988 Gm44055-201ENSMUST00000204376 247 ntBASIC0□□□□□ -2.41
Sdc4O35988 Mir451a-201ENSMUST00000093557 72 ntBASIC0□□□□□ -2.41
Sdc4O35988 Mir709-201ENSMUST00000102190 88 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Mir767-201ENSMUST00000103256 107 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm22113-201ENSMUST00000158343 104 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm37337-201ENSMUST00000192601 993 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.01□□□□□ -2.41
Sdc4O35988 Gm22771-201ENSMUST00000104449 91 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm20462-201ENSMUST00000172623 408 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.02□□□□□ -2.41
Sdc4O35988 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm25204-201ENSMUST00000082843 106 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.03□□□□□ -2.41
Sdc4O35988 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm27540-201ENSMUST00000184950 187 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm44473-201ENSMUST00000204039 152 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Snord95-201ENSMUST00000082846 68 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.04□□□□□ -2.42
Sdc4O35988 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm24241-201ENSMUST00000157787 145 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.05□□□□□ -2.42
Sdc4O35988 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.06□□□□□ -2.42
Sdc4O35988 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.06□□□□□ -2.42
Sdc4O35988 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.06□□□□□ -2.42
Sdc4O35988 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.06□□□□□ -2.42
Sdc4O35988 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.06□□□□□ -2.42
Sdc4O35988 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms