Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.6□□□□□ -2.51
Col6a3E9PWQ3 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.6□□□□□ -2.51
Col6a3E9PWQ3 Gm22935-201ENSMUST00000103960 104 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm23118-201ENSMUST00000122657 187 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Mir721-201ENSMUST00000200230 88 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm12106-201ENSMUST00000116006 1200 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.61□□□□□ -2.51
Col6a3E9PWQ3 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm24892-201ENSMUST00000122747 104 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm26245-201ENSMUST00000178491 107 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm24005-201ENSMUST00000158459 296 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm19901-201ENSMUST00000192191 495 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Mir677-202ENSMUST00000197076 78 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm22776-201ENSMUST00000178634 94 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm23767-201ENSMUST00000179278 94 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.62□□□□□ -2.51
Col6a3E9PWQ3 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm25253-201ENSMUST00000179958 107 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Mir702-201ENSMUST00000102285 109 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 CT030184.1-201ENSMUST00000222393 416 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm23645-201ENSMUST00000083228 108 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm42721-201ENSMUST00000197165 1523 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm44665-201ENSMUST00000205381 251 ntBASIC-0.63□□□□□ -2.51
Col6a3E9PWQ3 Gm12016-201ENSMUST00000119079 681 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm25598-201ENSMUST00000179031 107 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm37923-201ENSMUST00000191624 161 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm28740-201ENSMUST00000186142 215 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.64□□□□□ -2.51
Col6a3E9PWQ3 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm25513-201ENSMUST00000083861 162 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm37630-201ENSMUST00000194210 1456 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm23454-201ENSMUST00000083332 133 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm22577-201ENSMUST00000083731 109 ntBASIC-0.65□□□□□ -2.51
Col6a3E9PWQ3 Gm23184-201ENSMUST00000122594 131 ntBASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm24382-201ENSMUST00000122698 107 ntBASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm23535-201ENSMUST00000157542 106 ntBASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.66□□□□□ -2.51
Col6a3E9PWQ3 Gm25294-201ENSMUST00000122791 104 ntBASIC-0.66□□□□□ -2.52
Col6a3E9PWQ3 Gm31849-201ENSMUST00000220306 375 ntBASIC-0.66□□□□□ -2.52
Col6a3E9PWQ3 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.66□□□□□ -2.52
Col6a3E9PWQ3 Gm25213-201ENSMUST00000102388 113 ntBASIC-0.67□□□□□ -2.52
Col6a3E9PWQ3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-0.67□□□□□ -2.52
Col6a3E9PWQ3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-0.67□□□□□ -2.52
Col6a3E9PWQ3 Gm9059-201ENSMUST00000118319 183 ntBASIC-0.67□□□□□ -2.52
Col6a3E9PWQ3 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
Col6a3E9PWQ3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms