Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Mir7227-201ENSMUST00000200408 59 ntBASIC0.94□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm46993-201ENSMUST00000220708 259 ntBASIC0.94□□□□□ -2.26
Trbv12-1A0A0B4J1H0 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.94□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm25636-201ENSMUST00000082666 133 ntBASIC0.94□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.94□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm24375-201ENSMUST00000104397 132 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm25783-201ENSMUST00000122525 190 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm22836-201ENSMUST00000158441 61 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm22425-201ENSMUST00000158532 138 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm22914-201ENSMUST00000175195 77 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm22448-201ENSMUST00000179254 107 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm26968-201ENSMUST00000182894 481 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm28008-201ENSMUST00000184021 186 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm44396-201ENSMUST00000199843 114 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Mir22-201ENSMUST00000083595 95 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Mir324-201ENSMUST00000083600 89 ntBASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trbv12-1A0A0B4J1H0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm23941-201ENSMUST00000101953 107 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm25875-201ENSMUST00000104323 107 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm22984-201ENSMUST00000122751 122 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm22491-201ENSMUST00000157190 102 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm25838-201ENSMUST00000158920 120 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Mir6380-201ENSMUST00000184334 81 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm21088-201ENSMUST00000190875 316 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm38274-201ENSMUST00000195689 148 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm43911-201ENSMUST00000203097 76 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm44959-201ENSMUST00000209127 231 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm45508-201ENSMUST00000209298 299 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm26497-201ENSMUST00000083146 107 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.92□□□□□ -2.26
Trbv12-1A0A0B4J1H0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm17919-201ENSMUST00000173344 312 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm20391-201ENSMUST00000174722 106 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm25949-201ENSMUST00000175333 114 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm23267-201ENSMUST00000178490 132 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm42533-201ENSMUST00000196247 157 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm44057-201ENSMUST00000204547 96 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm45268-201ENSMUST00000210046 370 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm24204-201ENSMUST00000082950 107 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.91□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Trbv12-1A0A0B4J1H0 Gm25538-201ENSMUST00000101943 107 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm25615-201ENSMUST00000177836 94 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm27365-201ENSMUST00000184041 177 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Mir7009-201ENSMUST00000184519 64 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm44468-201ENSMUST00000199516 105 ntBASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm13801-201ENSMUST00000120750 160 ntBASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm42594-201ENSMUST00000199511 246 ntBASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm26447-201ENSMUST00000082448 129 ntBASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm23406-201ENSMUST00000082537 122 ntBASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.89□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Mir654-201ENSMUST00000104787 84 ntBASIC0.88□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm22097-201ENSMUST00000157929 278 ntBASIC0.88□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm25768-201ENSMUST00000158570 98 ntBASIC0.88□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.88□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm25683-201ENSMUST00000083940 131 ntBASIC0.88□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm23130-201ENSMUST00000104252 74 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm24942-201ENSMUST00000158328 114 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm22200-201ENSMUST00000158614 67 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm24154-201ENSMUST00000175261 130 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm27894-201ENSMUST00000184177 92 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm38060-201ENSMUST00000194822 464 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm44326-201ENSMUST00000198226 101 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm44301-201ENSMUST00000200362 143 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.87□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm24000-201ENSMUST00000158063 89 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm20923-201ENSMUST00000190009 319 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm29107-201ENSMUST00000190910 347 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Snora19-201ENSMUST00000082962 132 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm23658-201ENSMUST00000083233 132 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Mir33-201ENSMUST00000083531 69 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm10222-201ENSMUST00000088336 294 ntBASIC0.86□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm22553-201ENSMUST00000157797 295 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm28016-201ENSMUST00000184594 196 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm44320-201ENSMUST00000199276 86 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm44052-201ENSMUST00000203382 396 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm18213-201ENSMUST00000207850 178 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm45616-201ENSMUST00000211711 319 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.85□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.84□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm23329-201ENSMUST00000157415 108 ntBASIC0.84□□□□□ -2.27
Trbv12-1A0A0B4J1H0 Gm25558-201ENSMUST00000158083 106 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms