Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm13797-201ENSMUST00000121792 120 ntBASIC1.92□□□□□ -2.1
Trim54Q9ERP3 Gm22551-201ENSMUST00000157795 103 ntBASIC1.92□□□□□ -2.1
Trim54Q9ERP3 Gm22553-201ENSMUST00000157797 295 ntBASIC1.92□□□□□ -2.1
Trim54Q9ERP3 Gm44308-201ENSMUST00000197080 99 ntBASIC1.92□□□□□ -2.1
Trim54Q9ERP3 Gm25357-201ENSMUST00000082745 72 ntBASIC1.92□□□□□ -2.1
Trim54Q9ERP3 Snora3-201ENSMUST00000083082 132 ntBASIC1.92□□□□□ -2.1
Trim54Q9ERP3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm25832-201ENSMUST00000104140 130 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm25051-201ENSMUST00000158602 249 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Mir669k-201ENSMUST00000177742 127 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm5900-201ENSMUST00000179862 375 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm25673-201ENSMUST00000179957 127 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Mir7683-201ENSMUST00000183842 61 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm37778-201ENSMUST00000191732 190 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Gm19855-201ENSMUST00000210145 249 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trim54Q9ERP3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm24121-201ENSMUST00000102029 106 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm23836-201ENSMUST00000104434 129 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm13560-201ENSMUST00000121865 329 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm25825-201ENSMUST00000157091 124 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm23172-201ENSMUST00000157160 124 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm23542-201ENSMUST00000158208 96 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Mir6419-201ENSMUST00000184784 113 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
Trim54Q9ERP3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm22279-201ENSMUST00000157200 93 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm24783-201ENSMUST00000157639 100 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm25884-201ENSMUST00000157782 62 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm37586-201ENSMUST00000193654 204 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.89□□□□□ -2.11
Trim54Q9ERP3 Gm27544-201ENSMUST00000185069 155 ntBASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Gm25820-201ENSMUST00000198589 127 ntBASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Gm45116-201ENSMUST00000207392 275 ntBASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Gm25634-201ENSMUST00000082667 105 ntBASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Gm24151-201ENSMUST00000082758 141 ntBASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim54Q9ERP3 Gm24867-201ENSMUST00000104161 107 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm24374-201ENSMUST00000104394 106 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm23665-201ENSMUST00000158054 62 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm23545-201ENSMUST00000158205 104 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm25654-201ENSMUST00000158467 88 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm28537-201ENSMUST00000189026 315 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm29631-201ENSMUST00000191065 315 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Gm24261-201ENSMUST00000083744 104 ntBASIC1.87□□□□□ -2.11
Trim54Q9ERP3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm22051-201ENSMUST00000117002 127 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm15067-201ENSMUST00000119534 156 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm22665-201ENSMUST00000158720 275 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Mir6379-201ENSMUST00000183392 115 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm42719-201ENSMUST00000197393 355 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm25142-201ENSMUST00000082698 107 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trim54Q9ERP3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 U6.1-201ENSMUST00000157443 101 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Gm24572-201ENSMUST00000175505 88 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Gm24656-201ENSMUST00000177548 132 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Gm27585-201ENSMUST00000183717 199 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Mir384-201ENSMUST00000083565 88 ntBASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim54Q9ERP3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm23766-201ENSMUST00000103894 80 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm26482-201ENSMUST00000158015 62 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm24729-201ENSMUST00000158225 137 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm25015-201ENSMUST00000158400 128 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm18433-201ENSMUST00000192747 197 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Mir7116-201ENSMUST00000195956 70 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms