Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm22509-201ENSMUST00000082775 107 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm24234-201ENSMUST00000104316 107 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm22674-201ENSMUST00000104413 131 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm16186-201ENSMUST00000120132 216 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm23434-201ENSMUST00000157179 100 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm26084-201ENSMUST00000157903 104 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm44320-201ENSMUST00000199276 86 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm44966-201ENSMUST00000208096 157 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.95□□□□□ -1.94
Trim56Q80VI1 Gm23847-201ENSMUST00000083829 110 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.95□□□□□ -1.94
Trim56Q80VI1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trim56Q80VI1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trim56Q80VI1 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trim56Q80VI1 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm22750-201ENSMUST00000102076 103 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm22782-201ENSMUST00000104082 132 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm26011-201ENSMUST00000104410 104 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm26099-201ENSMUST00000157248 109 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm23599-201ENSMUST00000157261 251 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Gm23445-201ENSMUST00000082800 107 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Snord118-201ENSMUST00000082965 135 ntBASIC2.94□□□□□ -1.94
Trim56Q80VI1 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gm13246-201ENSMUST00000120994 315 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Rnu7-201ENSMUST00000158458 62 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gm25476-201ENSMUST00000175125 185 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gm28900-201ENSMUST00000185232 156 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Mir7657-201ENSMUST00000196051 57 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gm42807-201ENSMUST00000200141 329 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gm25006-201ENSMUST00000083813 107 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim56Q80VI1 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.93□□□□□ -1.94
Trim56Q80VI1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm24171-201ENSMUST00000104126 131 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm24375-201ENSMUST00000104397 132 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm15069-201ENSMUST00000117792 192 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm15068-201ENSMUST00000119796 192 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm24632-201ENSMUST00000122770 323 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm25060-201ENSMUST00000157374 130 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm22500-201ENSMUST00000158982 99 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Mir6350-201ENSMUST00000183639 105 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm35736-201ENSMUST00000203681 313 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm24030-201ENSMUST00000083931 164 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Mir489-201ENSMUST00000093599 107 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.92□□□□□ -1.94
Trim56Q80VI1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trim56Q80VI1 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim56Q80VI1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trim56Q80VI1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim56Q80VI1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm25753-201ENSMUST00000116792 121 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm16355-201ENSMUST00000128606 231 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm23983-201ENSMUST00000157142 114 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm24075-201ENSMUST00000158175 72 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm24212-201ENSMUST00000158258 132 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm25364-201ENSMUST00000158851 107 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm27668-201ENSMUST00000184188 120 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm8219-201ENSMUST00000218309 242 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.91□□□□□ -1.94
Trim56Q80VI1 Gm26341-201ENSMUST00000104561 134 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Mir293-201ENSMUST00000104841 80 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Gm13756-201ENSMUST00000117618 222 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Gm22708-201ENSMUST00000158987 103 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Gm23567-201ENSMUST00000178005 107 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Mir669j-201ENSMUST00000179023 121 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim56Q80VI1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Snord7-201ENSMUST00000083781 97 ntBASIC2.9□□□□□ -1.95
Trim56Q80VI1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.89□□□□□ -1.95
Trim56Q80VI1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim56Q80VI1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Snord64-201ENSMUST00000104003 67 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Gm22535-201ENSMUST00000158174 119 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Gm24210-201ENSMUST00000158263 133 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Gm24837-201ENSMUST00000158683 81 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Gm45386-201ENSMUST00000210194 218 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Trim56Q80VI1 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.89□□□□□ -1.95
Trim56Q80VI1 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim56Q80VI1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim56Q80VI1 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim56Q80VI1 Gm14502-201ENSMUST00000118154 113 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Gm7209-201ENSMUST00000122339 333 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim56Q80VI1 Gm25623-201ENSMUST00000157216 108 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Gm23113-201ENSMUST00000158477 99 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 231.3 ms