Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm16328-201ENSMUST00000126985 196 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm22338-201ENSMUST00000157715 129 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm24769-201ENSMUST00000158506 129 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm26157-201ENSMUST00000158974 126 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Mir3087-201ENSMUST00000199405 56 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm25813-201ENSMUST00000082748 191 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm24536-201ENSMUST00000083144 107 ntBASIC2.4□□□□□ -2.03
Ddx55Q6ZPL9 Gm24280-201ENSMUST00000104237 134 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Mir293-201ENSMUST00000104841 80 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm25985-201ENSMUST00000122677 107 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm22586-201ENSMUST00000157507 122 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm24900-201ENSMUST00000158128 134 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Mir7232-201ENSMUST00000197929 74 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm44555-201ENSMUST00000209008 148 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm24661-201ENSMUST00000083205 104 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm23249-201ENSMUST00000083369 161 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.39□□□□□ -2.03
Ddx55Q6ZPL9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Ddx55Q6ZPL9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ddx55Q6ZPL9 Gm24276-201ENSMUST00000102181 110 ntBASIC2.38□□□□□ -2.03
Ddx55Q6ZPL9 Gm22348-201ENSMUST00000178674 79 ntBASIC2.38□□□□□ -2.03
Ddx55Q6ZPL9 Gm23766-201ENSMUST00000103894 80 ntBASIC2.37□□□□□ -2.03
Ddx55Q6ZPL9 Gm26280-201ENSMUST00000157096 101 ntBASIC2.37□□□□□ -2.03
Ddx55Q6ZPL9 Gm24106-201ENSMUST00000175498 127 ntBASIC2.37□□□□□ -2.03
Ddx55Q6ZPL9 Gm28169-201ENSMUST00000190342 345 ntBASIC2.37□□□□□ -2.03
Ddx55Q6ZPL9 Gm43722-201ENSMUST00000196054 124 ntBASIC2.37□□□□□ -2.03
Ddx55Q6ZPL9 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.37□□□□□ -2.03
Ddx55Q6ZPL9 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Gm23665-201ENSMUST00000158054 62 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Gm44052-201ENSMUST00000203382 396 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Mir155-201ENSMUST00000083463 65 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ddx55Q6ZPL9 Gm28912-201ENSMUST00000189001 234 ntBASIC2.35□□□□□ -2.03
Ddx55Q6ZPL9 Gm24313-201ENSMUST00000082561 133 ntBASIC2.35□□□□□ -2.03
Ddx55Q6ZPL9 Gm23678-201ENSMUST00000083157 107 ntBASIC2.35□□□□□ -2.03
Ddx55Q6ZPL9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Gm25825-201ENSMUST00000157091 124 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Gm24638-201ENSMUST00000179807 132 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Gm22704-201ENSMUST00000083027 137 ntBASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Ddx55Q6ZPL9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.34□□□□□ -2.04
Ddx55Q6ZPL9 Gm22556-201ENSMUST00000157803 100 ntBASIC2.33□□□□□ -2.04
Ddx55Q6ZPL9 Gm25599-201ENSMUST00000157816 103 ntBASIC2.33□□□□□ -2.04
Ddx55Q6ZPL9 Gm23854-201ENSMUST00000158378 108 ntBASIC2.33□□□□□ -2.04
Ddx55Q6ZPL9 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.33□□□□□ -2.04
Ddx55Q6ZPL9 Gm24929-201ENSMUST00000083403 139 ntBASIC2.33□□□□□ -2.04
Ddx55Q6ZPL9 Mir429-201ENSMUST00000083493 83 ntBASIC2.33□□□□□ -2.04
Ddx55Q6ZPL9 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Gm23990-201ENSMUST00000117031 117 ntBASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Mir7679-201ENSMUST00000183379 63 ntBASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Gm22686-201ENSMUST00000082847 100 ntBASIC2.32□□□□□ -2.04
Ddx55Q6ZPL9 Gm23578-201ENSMUST00000103943 104 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm6952-201ENSMUST00000118629 159 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm23390-201ENSMUST00000157393 106 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm24478-201ENSMUST00000157439 158 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm22476-201ENSMUST00000158902 100 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm16404-201ENSMUST00000177739 468 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm22286-201ENSMUST00000179708 107 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm14598-201ENSMUST00000180109 468 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm14625-201ENSMUST00000180231 468 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm5010-201ENSMUST00000213131 260 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm25788-201ENSMUST00000082721 131 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm22683-201ENSMUST00000082854 137 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Mir301-201ENSMUST00000083655 86 ntBASIC2.31□□□□□ -2.04
Ddx55Q6ZPL9 Gm26293-201ENSMUST00000104170 84 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm24076-201ENSMUST00000158179 94 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm22606-201ENSMUST00000158290 103 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm24333-201ENSMUST00000175101 84 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Mir7016-201ENSMUST00000184308 72 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Mir6352-201ENSMUST00000184495 116 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm29604-201ENSMUST00000187176 163 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm21064-202ENSMUST00000190583 278 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm3724-201ENSMUST00000197957 349 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.3□□□□□ -2.04
Ddx55Q6ZPL9 Gm14536-201ENSMUST00000118324 138 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 276.5 ms