Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm14491-201ENSMUST00000121919 199 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm25663-201ENSMUST00000157698 135 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Mir3061-201ENSMUST00000175129 91 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm23148-201ENSMUST00000180367 107 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm37713-201ENSMUST00000191746 198 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm25929-201ENSMUST00000082784 107 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm25258-201ENSMUST00000083049 107 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm23851-201ENSMUST00000083831 103 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm25937-201ENSMUST00000083912 107 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm25544-201ENSMUST00000122676 120 ntBASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Gm22233-201ENSMUST00000157464 114 ntBASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Gm23101-201ENSMUST00000157550 137 ntBASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Gm25868-201ENSMUST00000158253 114 ntBASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Gm27540-201ENSMUST00000184950 187 ntBASIC0.53□□□□□ -2.32
Col27a1Q5QNQ9 Gm42606-201ENSMUST00000114209 239 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm12770-201ENSMUST00000121734 462 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm25825-201ENSMUST00000157091 124 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm23542-201ENSMUST00000158208 96 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm28661-201ENSMUST00000188231 681 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 DQ267101-201ENSMUST00000082562 73 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm23022-201ENSMUST00000158768 180 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm45403-201ENSMUST00000209453 276 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm9795-201ENSMUST00000062156 693 ntBASIC0.52□□□□□ -2.33
Col27a1Q5QNQ9 Gm24498-201ENSMUST00000158445 102 ntBASIC0.51□□□□□ -2.33
Col27a1Q5QNQ9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.51□□□□□ -2.33
Col27a1Q5QNQ9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm14782-201ENSMUST00000120151 195 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm14574-201ENSMUST00000120644 279 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm24909-201ENSMUST00000157290 280 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm22215-201ENSMUST00000157558 96 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm27545-201ENSMUST00000184755 202 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm28408-201ENSMUST00000191557 463 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm44976-201ENSMUST00000205543 261 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm23299-201ENSMUST00000082708 79 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm26056-201ENSMUST00000083043 104 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Snord32a-201ENSMUST00000083285 83 ntBASIC0.5□□□□□ -2.33
Col27a1Q5QNQ9 Gm24271-201ENSMUST00000102327 111 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm13560-201ENSMUST00000121865 329 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm25970-201ENSMUST00000157165 86 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm24440-201ENSMUST00000157236 63 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm25838-201ENSMUST00000158920 120 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm24512-201ENSMUST00000174963 65 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm23793-201ENSMUST00000179396 117 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm27410-201ENSMUST00000183851 115 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm43884-201ENSMUST00000204251 559 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm44921-201ENSMUST00000205290 301 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm11351-202ENSMUST00000225724 478 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm25204-201ENSMUST00000082843 106 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm22704-201ENSMUST00000083027 137 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm24616-201ENSMUST00000083274 139 ntBASIC0.49□□□□□ -2.33
Col27a1Q5QNQ9 Gm11792-201ENSMUST00000120640 168 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm25884-201ENSMUST00000157782 62 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm23474-201ENSMUST00000158884 75 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm26180-201ENSMUST00000179942 107 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm27977-201ENSMUST00000185159 111 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm9227-201ENSMUST00000194733 566 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm5023-201ENSMUST00000217442 587 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm23412-201ENSMUST00000083017 107 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm22294-201ENSMUST00000083308 104 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm25627-201ENSMUST00000084003 153 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm22365-201ENSMUST00000093750 117 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm25982-201ENSMUST00000157920 101 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm24192-201ENSMUST00000157978 145 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm23898-201ENSMUST00000158111 103 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm23059-201ENSMUST00000158978 107 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm44055-201ENSMUST00000204376 247 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm10264-201ENSMUST00000220589 429 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm25078-201ENSMUST00000082530 107 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Snora41-201ENSMUST00000082668 132 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm22809-201ENSMUST00000082743 156 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Mir496a-201ENSMUST00000093627 79 ntBASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Col27a1Q5QNQ9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 238.4 ms