Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm26293-201ENSMUST00000104170 84 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm22477-201ENSMUST00000122569 316 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm23718-201ENSMUST00000157350 307 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm25920-201ENSMUST00000158307 99 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm22510-201ENSMUST00000179304 79 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm26336-201ENSMUST00000179449 79 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm26390-201ENSMUST00000179628 79 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm42623-201ENSMUST00000197225 379 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm44052-201ENSMUST00000203382 396 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm22297-201ENSMUST00000083312 106 ntBASIC2.58□□□□□ -2
Sox9Q04887 Gm25513-201ENSMUST00000083861 162 ntBASIC2.58□□□□□ -2
Sox9Q04887 Mir488-201ENSMUST00000093595 109 ntBASIC2.58□□□□□ -2
Sox9Q04887 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sox9Q04887 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.57□□□□□ -2
Sox9Q04887 Gm14536-201ENSMUST00000118324 138 ntBASIC2.57□□□□□ -2
Sox9Q04887 Gm15027-201ENSMUST00000120922 138 ntBASIC2.57□□□□□ -2
Sox9Q04887 Gm24771-201ENSMUST00000158508 137 ntBASIC2.57□□□□□ -2
Sox9Q04887 Gm26291-201ENSMUST00000158889 137 ntBASIC2.57□□□□□ -2
Sox9Q04887 Gm43587-201ENSMUST00000199590 204 ntBASIC2.57□□□□□ -2
Sox9Q04887 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.57□□□□□ -2
Sox9Q04887 Gm23239-201ENSMUST00000083006 181 ntBASIC2.57□□□□□ -2
Sox9Q04887 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.57□□□□□ -2
Sox9Q04887 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sox9Q04887 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm25321-201ENSMUST00000122558 102 ntBASIC2.56□□□□□ -2
Sox9Q04887 Snord53-201ENSMUST00000175146 78 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm27330-201ENSMUST00000184689 132 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm37579-201ENSMUST00000194291 142 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm42988-201ENSMUST00000198116 225 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm23722-201ENSMUST00000083002 130 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm24536-201ENSMUST00000083144 107 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm23264-201ENSMUST00000083372 107 ntBASIC2.56□□□□□ -2
Sox9Q04887 Mir222-201ENSMUST00000083537 79 ntBASIC2.56□□□□□ -2
Sox9Q04887 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.56□□□□□ -2
Sox9Q04887 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm25825-201ENSMUST00000157091 124 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm24475-201ENSMUST00000157435 143 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm24054-201ENSMUST00000158619 105 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm22139-201ENSMUST00000158747 105 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm23337-201ENSMUST00000158959 118 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm26337-201ENSMUST00000178000 79 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm29308-201ENSMUST00000188863 315 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm28912-201ENSMUST00000189001 234 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm28537-201ENSMUST00000189026 315 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm29631-201ENSMUST00000191065 315 ntBASIC2.55□□□□□ -2
Sox9Q04887 Mir497-201ENSMUST00000200557 84 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm35736-201ENSMUST00000203681 313 ntBASIC2.55□□□□□ -2
Sox9Q04887 Gm18502-201ENSMUST00000218679 199 ntBASIC2.55□□□□□ -2
Sox9Q04887 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.55□□□□□ -2
Sox9Q04887 Mir155-201ENSMUST00000083463 65 ntBASIC2.55□□□□□ -2
Sox9Q04887 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sox9Q04887 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sox9Q04887 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sox9Q04887 Gm6444-201ENSMUST00000119611 458 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm26411-201ENSMUST00000157668 107 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm23043-201ENSMUST00000157890 109 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm23409-201ENSMUST00000158516 237 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm19257-201ENSMUST00000186121 183 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm21064-202ENSMUST00000190583 278 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm18346-201ENSMUST00000216782 325 ntBASIC2.54□□□□□ -2
Sox9Q04887 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.54□□□□□ -2
Sox9Q04887 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.54□□□□□ -2
Sox9Q04887 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sox9Q04887 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sox9Q04887 Gm22850-201ENSMUST00000157714 82 ntBASIC2.53□□□□□ -2
Sox9Q04887 Mir1927-201ENSMUST00000158579 109 ntBASIC2.53□□□□□ -2
Sox9Q04887 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.53□□□□□ -2
Sox9Q04887 Gm44326-201ENSMUST00000198226 101 ntBASIC2.53□□□□□ -2
Sox9Q04887 Mir3961-201ENSMUST00000198795 59 ntBASIC2.53□□□□□ -2
Sox9Q04887 Mir3087-201ENSMUST00000199405 56 ntBASIC2.53□□□□□ -2
Sox9Q04887 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.53□□□□□ -2
Sox9Q04887 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sox9Q04887 Gm23651-201ENSMUST00000116755 120 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm22731-201ENSMUST00000158086 94 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm25371-201ENSMUST00000158162 101 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm26157-201ENSMUST00000158974 126 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm23922-201ENSMUST00000178792 79 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm24657-201ENSMUST00000180085 79 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm22996-201ENSMUST00000180236 79 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm45654-201ENSMUST00000210980 123 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Snord118-201ENSMUST00000082965 135 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Gm22866-201ENSMUST00000083947 177 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sox9Q04887 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Sox9Q04887 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.52□□□□□ -2.01
Sox9Q04887 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Sox9Q04887 Gm22149-201ENSMUST00000104442 136 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Gm22486-201ENSMUST00000116815 137 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Rnu7-201ENSMUST00000158458 62 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Gm23090-201ENSMUST00000177331 78 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Gm28409-201ENSMUST00000187064 103 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Gm38364-201ENSMUST00000191814 179 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.51□□□□□ -2.01
Sox9Q04887 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.51□□□□□ -2.01
Sox9Q04887 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.51□□□□□ -2.01
Sox9Q04887 Gm23320-201ENSMUST00000104462 127 ntBASIC2.5□□□□□ -2.01
Sox9Q04887 Gm22373-201ENSMUST00000104584 89 ntBASIC2.5□□□□□ -2.01
Sox9Q04887 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 157.7 ms