Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.12□□□□□ -1.91
Col18a1P39061 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col18a1P39061 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col18a1P39061 Gm22556-201ENSMUST00000157803 100 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm28270-201ENSMUST00000188550 109 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm28328-201ENSMUST00000188869 109 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm38364-201ENSMUST00000191814 179 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm15235-201ENSMUST00000200572 194 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm25628-201ENSMUST00000084002 105 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC3.12□□□□□ -1.91
Col18a1P39061 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 Mir1950-201ENSMUST00000158526 74 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.11□□□□□ -1.91
Col18a1P39061 AC069074.1-201ENSMUST00000220048 381 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 Gm24611-201ENSMUST00000083272 107 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 Mir7-1-201ENSMUST00000083500 108 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col18a1P39061 Gm14917-201ENSMUST00000118872 2105 ntBASIC3.11□□□□□ -1.91
Col18a1P39061 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col18a1P39061 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 AC164629.4-201ENSMUST00000218505 3247 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 Gm14602-201ENSMUST00000118625 340 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 Gm37037-201ENSMUST00000194475 424 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 AL928567.1-201ENSMUST00000197891 138 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 Gm45429-201ENSMUST00000209527 172 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 Gm8031-201ENSMUST00000213430 626 ntBASIC3.1□□□□□ -1.91
Col18a1P39061 Gm25068-201ENSMUST00000103895 110 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm44489-201ENSMUST00000104619 97 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.09□□□□□ -1.91
Col18a1P39061 Gm25882-201ENSMUST00000157784 85 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm26498-201ENSMUST00000177799 79 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm25354-201ENSMUST00000179110 105 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm26230-201ENSMUST00000180141 79 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Mir6901-201ENSMUST00000185062 62 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.09□□□□□ -1.91
Col18a1P39061 Gm44521-201ENSMUST00000206469 217 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 AC122327.1-201ENSMUST00000220778 108 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.09□□□□□ -1.91
Col18a1P39061 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Col18a1P39061 Gm22779-201ENSMUST00000104085 107 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm23654-201ENSMUST00000116758 126 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm11786-201ENSMUST00000120799 155 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm23253-201ENSMUST00000157441 104 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm24736-201ENSMUST00000158862 130 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm28000-201ENSMUST00000184380 85 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm27477-201ENSMUST00000184649 143 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm42739-201ENSMUST00000200687 226 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm25589-201ENSMUST00000082502 166 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm23293-201ENSMUST00000082552 104 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.08□□□□□ -1.92
Col18a1P39061 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.08□□□□□ -1.92
Col18a1P39061 Gm26001-201ENSMUST00000157989 103 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Mir1936-201ENSMUST00000158699 93 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col18a1P39061 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.07□□□□□ -1.92
Col18a1P39061 Mir201-201ENSMUST00000083470 66 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col18a1P39061 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col18a1P39061 Gm13273-201ENSMUST00000119737 159 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Gm22770-201ENSMUST00000158368 67 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Gm24572-201ENSMUST00000175505 88 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.07□□□□□ -1.92
Col18a1P39061 Gm22299-201ENSMUST00000082663 136 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Snord14d-201ENSMUST00000083424 86 ntBASIC3.07□□□□□ -1.92
Col18a1P39061 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col18a1P39061 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col18a1P39061 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.06□□□□□ -1.92
Col18a1P39061 Mir1951-201ENSMUST00000157981 89 ntBASIC3.06□□□□□ -1.92
Col18a1P39061 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col18a1P39061 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col18a1P39061 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Col18a1P39061 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col18a1P39061 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col18a1P39061 Mir547-201ENSMUST00000102051 78 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm25836-201ENSMUST00000158918 123 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm26922-201ENSMUST00000082687 72 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Col18a1P39061 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col18a1P39061 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col18a1P39061 Gm25091-201ENSMUST00000103997 71 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm22517-201ENSMUST00000158265 136 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm25491-201ENSMUST00000158733 308 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm23005-201ENSMUST00000158950 136 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm16561-201ENSMUST00000163001 192 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm23714-201ENSMUST00000179259 105 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm23370-202ENSMUST00000197008 129 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Gm23509-201ENSMUST00000083080 160 ntBASIC3.05□□□□□ -1.92
Col18a1P39061 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col18a1P39061 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.04□□□□□ -1.92
Col18a1P39061 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms