Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm22576-201ENSMUST00000083733 104 ntBASIC3.22□□□□□ -1.89
Limch1Q3UH68 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.21□□□□□ -1.89
Limch1Q3UH68 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm9009-201ENSMUST00000117321 326 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Mir1927-201ENSMUST00000158579 109 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm24681-201ENSMUST00000158760 107 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm27672-201ENSMUST00000183751 204 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm37377-201ENSMUST00000191733 304 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm25130-201ENSMUST00000082650 156 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm25006-201ENSMUST00000083813 107 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Gm25513-201ENSMUST00000083861 162 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Limch1Q3UH68 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.21□□□□□ -1.9
Limch1Q3UH68 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Limch1Q3UH68 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Limch1Q3UH68 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Limch1Q3UH68 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Limch1Q3UH68 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Limch1Q3UH68 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Gm22782-201ENSMUST00000104082 132 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Gm14567-201ENSMUST00000117155 174 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 DQ267100-201ENSMUST00000122600 72 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Gm25828-201ENSMUST00000157087 95 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Gm24879-201ENSMUST00000158386 143 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Trbv7-201ENSMUST00000193339 402 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Gm44358-201ENSMUST00000196301 98 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.2□□□□□ -1.9
Limch1Q3UH68 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Limch1Q3UH68 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Limch1Q3UH68 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Limch1Q3UH68 Gm26081-201ENSMUST00000104068 132 ntBASIC3.19□□□□□ -1.9
Limch1Q3UH68 Gm23128-201ENSMUST00000104257 132 ntBASIC3.19□□□□□ -1.9
Limch1Q3UH68 Gm25153-201ENSMUST00000157118 156 ntBASIC3.19□□□□□ -1.9
Limch1Q3UH68 Gm22213-201ENSMUST00000157564 119 ntBASIC3.19□□□□□ -1.9
Limch1Q3UH68 Gm23128-202ENSMUST00000196578 133 ntBASIC3.19□□□□□ -1.9
Limch1Q3UH68 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.19□□□□□ -1.9
Limch1Q3UH68 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Limch1Q3UH68 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Limch1Q3UH68 Snord64-201ENSMUST00000104003 67 ntBASIC3.18□□□□□ -1.9
Limch1Q3UH68 Mir7242-201ENSMUST00000183710 79 ntBASIC3.18□□□□□ -1.9
Limch1Q3UH68 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.18□□□□□ -1.9
Limch1Q3UH68 Gm45452-201ENSMUST00000210905 177 ntBASIC3.18□□□□□ -1.9
Limch1Q3UH68 Gm23264-201ENSMUST00000083372 107 ntBASIC3.18□□□□□ -1.9
Limch1Q3UH68 Gm25409-201ENSMUST00000083764 131 ntBASIC3.18□□□□□ -1.9
Limch1Q3UH68 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Limch1Q3UH68 Gm25753-201ENSMUST00000116792 121 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Limch1Q3UH68 Gm23599-201ENSMUST00000157261 251 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 Gm22651-201ENSMUST00000157872 94 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 Gm24816-201ENSMUST00000175311 151 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 Gm27786-201ENSMUST00000184337 70 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.17□□□□□ -1.9
Limch1Q3UH68 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm25500-201ENSMUST00000104426 123 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm24922-201ENSMUST00000158511 102 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm22500-201ENSMUST00000158982 99 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm25380-201ENSMUST00000175463 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm24641-201ENSMUST00000178055 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm25484-201ENSMUST00000178217 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm26138-201ENSMUST00000179236 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm22821-201ENSMUST00000179288 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm27668-201ENSMUST00000184188 120 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm19257-201ENSMUST00000186121 183 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm44921-201ENSMUST00000205290 301 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm23140-201ENSMUST00000082487 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm23298-201ENSMUST00000083181 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm24614-201ENSMUST00000083269 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm22057-201ENSMUST00000083387 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Mir155-201ENSMUST00000083463 65 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Gm25516-201ENSMUST00000083857 107 ntBASIC3.16□□□□□ -1.9
Limch1Q3UH68 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Limch1Q3UH68 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Limch1Q3UH68 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Limch1Q3UH68 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Limch1Q3UH68 Gm26247-201ENSMUST00000116702 91 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 Gm25646-201ENSMUST00000178527 79 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 Gm23963-201ENSMUST00000179603 77 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 Mir7068-201ENSMUST00000183439 74 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.15□□□□□ -1.91
Limch1Q3UH68 Gm8219-201ENSMUST00000218309 242 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 Mir466-201ENSMUST00000093591 73 ntBASIC3.15□□□□□ -1.91
Limch1Q3UH68 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Limch1Q3UH68 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Gm12086-201ENSMUST00000120863 228 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Gm22011-201ENSMUST00000158790 123 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Gm22708-201ENSMUST00000158987 103 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Mir3076-201ENSMUST00000175415 60 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Mir669j-201ENSMUST00000179023 121 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Gm26175-201ENSMUST00000083794 131 ntBASIC3.14□□□□□ -1.91
Limch1Q3UH68 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Limch1Q3UH68 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Limch1Q3UH68 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Limch1Q3UH68 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms