Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sox9Q04887 Gm22752-201ENSMUST00000102083 109 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Gm22148-201ENSMUST00000104445 107 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Gm24676-201ENSMUST00000158758 75 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Gm16162-201ENSMUST00000162296 297 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Gm25996-201ENSMUST00000175393 117 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Sox9Q04887 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Gm6109-201ENSMUST00000223297 348 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Mir29c-201ENSMUST00000083614 88 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.65□□□□□ -1.99
Sox9Q04887 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sox9Q04887 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.65□□□□□ -1.99
Sox9Q04887 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Sox9Q04887 Gm13756-201ENSMUST00000117618 222 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Gm22381-201ENSMUST00000158186 107 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Gm26406-201ENSMUST00000158503 124 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Gm24736-201ENSMUST00000158862 130 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Gm23289-201ENSMUST00000175615 108 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Gm28169-201ENSMUST00000190342 345 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.64□□□□□ -1.99
Sox9Q04887 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.64□□□□□ -1.99
Sox9Q04887 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Sox9Q04887 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Sox9Q04887 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.64□□□□□ -1.99
Sox9Q04887 Gm24280-201ENSMUST00000104237 134 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm6952-201ENSMUST00000118629 159 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm23655-201ENSMUST00000122627 105 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.63□□□□□ -1.99
Sox9Q04887 Gm22330-201ENSMUST00000158068 115 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm25491-201ENSMUST00000158733 308 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm16546-201ENSMUST00000159442 355 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm20438-201ENSMUST00000174441 329 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm22699-201ENSMUST00000175376 105 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Mir21b-201ENSMUST00000184317 108 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm37693-201ENSMUST00000194562 234 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Gm44408-201ENSMUST00000200205 66 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.63□□□□□ -1.99
Sox9Q04887 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Mir186-201ENSMUST00000083497 71 ntBASIC2.63□□□□□ -1.99
Sox9Q04887 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sox9Q04887 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Sox9Q04887 Gm26077-201ENSMUST00000104064 123 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm13922-201ENSMUST00000119505 156 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.62□□□□□ -1.99
Sox9Q04887 Gm23966-201ENSMUST00000179823 107 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm27878-201ENSMUST00000184000 106 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Mir7225-201ENSMUST00000184178 54 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm18546-201ENSMUST00000197245 676 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Gm44555-201ENSMUST00000209008 148 ntBASIC2.62□□□□□ -1.99
Sox9Q04887 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
Sox9Q04887 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Sox9Q04887 Gm23010-201ENSMUST00000104151 126 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm26473-201ENSMUST00000116763 127 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm12941-201ENSMUST00000117934 220 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm23983-201ENSMUST00000157142 114 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm26403-201ENSMUST00000158500 105 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm24837-201ENSMUST00000158683 81 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Mir6353-201ENSMUST00000183596 113 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm27898-201ENSMUST00000183987 80 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm7214-201ENSMUST00000222428 272 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Gm22686-201ENSMUST00000082847 100 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.61□□□□□ -1.99
Sox9Q04887 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Sox9Q04887 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Sox9Q04887 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Sox9Q04887 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Sox9Q04887 Mir1298-201ENSMUST00000116681 98 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm26150-201ENSMUST00000157426 151 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Sox9Q04887 Gm25464-201ENSMUST00000175481 107 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm44491-201ENSMUST00000196794 96 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm44338-201ENSMUST00000198614 110 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm44470-201ENSMUST00000203913 142 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm26454-201ENSMUST00000082682 107 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.6□□□□□ -1.99
Sox9Q04887 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sox9Q04887 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Sox9Q04887 Gm23980-201ENSMUST00000157135 158 ntBASIC2.59□□□□□ -1.99
Sox9Q04887 Gm22967-201ENSMUST00000157956 239 ntBASIC2.59□□□□□ -1.99
Sox9Q04887 Gm22517-201ENSMUST00000158265 136 ntBASIC2.59□□□□□ -1.99
Sox9Q04887 Gm23005-201ENSMUST00000158950 136 ntBASIC2.59□□□□□ -1.99
Sox9Q04887 Gm26160-201ENSMUST00000158965 63 ntBASIC2.59□□□□□ -1.99
Sox9Q04887 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Sox9Q04887 Gm10813-201ENSMUST00000099936 90 ntBASIC2.59□□□□□ -1.99
Sox9Q04887 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.59□□□□□ -2
Sox9Q04887 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.59□□□□□ -2
Sox9Q04887 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Sox9Q04887 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox9Q04887 Gm25094-201ENSMUST00000103992 131 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms