Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm23016-201ENSMUST00000158431 62 ntBASIC0.23□□□□□ -2.37
Tpm1P58771 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Tpm1P58771 Gm28256-201ENSMUST00000188953 139 ntBASIC0.23□□□□□ -2.37
Tpm1P58771 Gm28559-201ENSMUST00000190532 139 ntBASIC0.23□□□□□ -2.37
Tpm1P58771 Mir500-201ENSMUST00000093600 92 ntBASIC0.23□□□□□ -2.37
Tpm1P58771 Gm22771-201ENSMUST00000104449 91 ntBASIC0.22□□□□□ -2.37
Tpm1P58771 Gm6985-201ENSMUST00000121255 271 ntBASIC0.22□□□□□ -2.37
Tpm1P58771 Gm14491-201ENSMUST00000121919 199 ntBASIC0.22□□□□□ -2.37
Tpm1P58771 Gm25434-201ENSMUST00000158278 167 ntBASIC0.22□□□□□ -2.37
Tpm1P58771 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.22□□□□□ -2.37
Tpm1P58771 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Tpm1P58771 Gm26424-201ENSMUST00000122530 104 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm26274-201ENSMUST00000157103 321 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm16539-201ENSMUST00000160086 327 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm26285-201ENSMUST00000177923 107 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm27717-201ENSMUST00000183933 151 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Tpm1P58771 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Tpm1P58771 Gm42988-201ENSMUST00000198116 225 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm44211-201ENSMUST00000204867 145 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.21□□□□□ -2.38
Tpm1P58771 Gm18113-201ENSMUST00000220630 303 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Gm23622-201ENSMUST00000082460 107 ntBASIC0.21□□□□□ -2.38
Tpm1P58771 Mir709-201ENSMUST00000102190 88 ntBASIC0.2□□□□□ -2.38
Tpm1P58771 Gm22435-201ENSMUST00000158552 128 ntBASIC0.2□□□□□ -2.38
Tpm1P58771 Mir6365-201ENSMUST00000183990 101 ntBASIC0.2□□□□□ -2.38
Tpm1P58771 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.2□□□□□ -2.38
Tpm1P58771 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.2□□□□□ -2.38
Tpm1P58771 Gm24616-201ENSMUST00000083274 139 ntBASIC0.2□□□□□ -2.38
Tpm1P58771 Gm24283-201ENSMUST00000104233 107 ntBASIC0.19□□□□□ -2.38
Tpm1P58771 Gm23853-201ENSMUST00000158375 104 ntBASIC0.19□□□□□ -2.38
Tpm1P58771 Mir1931-201ENSMUST00000158589 119 ntBASIC0.19□□□□□ -2.38
Tpm1P58771 Gm45119-201ENSMUST00000207612 199 ntBASIC0.19□□□□□ -2.38
Tpm1P58771 Gm22469-201ENSMUST00000104118 133 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm14761-201ENSMUST00000121363 262 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.18□□□□□ -2.38
Tpm1P58771 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.18□□□□□ -2.38
Tpm1P58771 Gm23024-201ENSMUST00000158770 292 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm18185-201ENSMUST00000186725 667 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm44726-201ENSMUST00000203427 217 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm45543-201ENSMUST00000209327 88 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm45541-201ENSMUST00000210443 54 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm25855-201ENSMUST00000082787 72 ntBASIC0.18□□□□□ -2.38
Tpm1P58771 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Tpm1P58771 Gm12837-201ENSMUST00000120131 373 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm23340-201ENSMUST00000158955 123 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm24818-201ENSMUST00000175093 161 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm25314-201ENSMUST00000178810 79 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm11392-201ENSMUST00000181419 710 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm45402-201ENSMUST00000211796 223 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm5023-201ENSMUST00000217442 587 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm8219-201ENSMUST00000218309 242 ntBASIC0.17□□□□□ -2.38
Tpm1P58771 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
Tpm1P58771 Snord89-201ENSMUST00000104516 110 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Gm14536-201ENSMUST00000118324 138 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Gm15027-201ENSMUST00000120922 138 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Gm24438-201ENSMUST00000157893 115 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Gm27919-201ENSMUST00000185163 107 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Gm26164-201ENSMUST00000083793 104 ntBASIC0.16□□□□□ -2.38
Tpm1P58771 Mir767-201ENSMUST00000103256 107 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Gm22841-201ENSMUST00000158443 62 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
Tpm1P58771 Gm18291-201ENSMUST00000190791 301 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Tpm1P58771 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.15□□□□□ -2.39
Tpm1P58771 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.14□□□□□ -2.39
Tpm1P58771 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
Tpm1P58771 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.14□□□□□ -2.39
Tpm1P58771 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.14□□□□□ -2.39
Tpm1P58771 Snord71-201ENSMUST00000104361 85 ntBASIC0.13□□□□□ -2.39
Tpm1P58771 Gm24833-201ENSMUST00000116775 120 ntBASIC0.13□□□□□ -2.39
Tpm1P58771 Gm14392-201ENSMUST00000120332 401 ntBASIC0.13□□□□□ -2.39
Tpm1P58771 Gm14413-201ENSMUST00000122158 408 ntBASIC0.13□□□□□ -2.39
Tpm1P58771 Gm6272-201ENSMUST00000121256 171 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm25318-201ENSMUST00000122554 314 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm23232-201ENSMUST00000157300 105 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm26022-201ENSMUST00000158663 108 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm24880-201ENSMUST00000158776 85 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm43406-201ENSMUST00000200356 334 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm44473-201ENSMUST00000204039 152 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm24527-201ENSMUST00000082920 107 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Mir32-201ENSMUST00000083610 70 ntBASIC0.12□□□□□ -2.39
Tpm1P58771 Gm11386-201ENSMUST00000117761 347 ntBASIC0.11□□□□□ -2.39
Tpm1P58771 Gm13711-201ENSMUST00000119708 453 ntBASIC0.11□□□□□ -2.39
Tpm1P58771 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.11□□□□□ -2.39
Tpm1P58771 Mir1951-201ENSMUST00000157981 89 ntBASIC0.11□□□□□ -2.39
Tpm1P58771 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.11□□□□□ -2.39
Tpm1P58771 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.11□□□□□ -2.39
Tpm1P58771 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.11□□□□□ -2.39
Tpm1P58771 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.11□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 173.5 ms