Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm22706-201ENSMUST00000157907 112 ntBASIC0.23□□□□□ -2.37
Cdx2P43241 Gm24963-201ENSMUST00000157916 144 ntBASIC0.23□□□□□ -2.37
Cdx2P43241 Gm25486-201ENSMUST00000158726 63 ntBASIC0.23□□□□□ -2.37
Cdx2P43241 Gm20391-201ENSMUST00000174722 106 ntBASIC0.23□□□□□ -2.37
Cdx2P43241 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Cdx2P43241 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.23□□□□□ -2.37
Cdx2P43241 Mir101a-201ENSMUST00000083517 83 ntBASIC0.23□□□□□ -2.37
Cdx2P43241 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Cdx2P43241 Mir654-201ENSMUST00000104787 84 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm15379-201ENSMUST00000121224 648 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm23169-201ENSMUST00000157157 112 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm23898-201ENSMUST00000158111 103 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Cdx2P43241 Gm27402-201ENSMUST00000183890 120 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm28438-201ENSMUST00000188299 345 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm37337-201ENSMUST00000192601 993 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm5034-201ENSMUST00000199115 634 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm44488-201ENSMUST00000199467 119 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm44055-201ENSMUST00000204376 247 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.22□□□□□ -2.37
Cdx2P43241 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Cdx2P43241 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Cdx2P43241 Gm22809-201ENSMUST00000082743 156 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm24356-201ENSMUST00000082859 106 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm25859-201ENSMUST00000083710 91 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.22□□□□□ -2.37
Cdx2P43241 Gm14946-201ENSMUST00000119859 296 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Gm25783-201ENSMUST00000122525 190 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Cdx2P43241 Gm25393-201ENSMUST00000157336 285 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.21□□□□□ -2.38
Cdx2P43241 Gm18588-201ENSMUST00000177308 492 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Gm24799-201ENSMUST00000178431 79 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.21□□□□□ -2.38
Cdx2P43241 Gm45658-201ENSMUST00000209197 580 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.21□□□□□ -2.38
Cdx2P43241 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cdx2P43241 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
Cdx2P43241 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.2□□□□□ -2.38
Cdx2P43241 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Cdx2P43241 Gm27717-201ENSMUST00000183933 151 ntBASIC0.2□□□□□ -2.38
Cdx2P43241 Gm45704-201ENSMUST00000212582 403 ntBASIC0.2□□□□□ -2.38
Cdx2P43241 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.2□□□□□ -2.38
Cdx2P43241 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.2□□□□□ -2.38
Cdx2P43241 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Cdx2P43241 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.19□□□□□ -2.38
Cdx2P43241 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.19□□□□□ -2.38
Cdx2P43241 Gm28343-201ENSMUST00000185386 112 ntBASIC0.19□□□□□ -2.38
Cdx2P43241 Gm25586-201ENSMUST00000082499 112 ntBASIC0.19□□□□□ -2.38
Cdx2P43241 Gm25801-201ENSMUST00000082638 106 ntBASIC0.19□□□□□ -2.38
Cdx2P43241 Mir324-201ENSMUST00000083600 89 ntBASIC0.19□□□□□ -2.38
Cdx2P43241 Gm23041-201ENSMUST00000083868 106 ntBASIC0.19□□□□□ -2.38
Cdx2P43241 Gm25627-201ENSMUST00000084003 153 ntBASIC0.19□□□□□ -2.38
Cdx2P43241 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Cdx2P43241 Gm26500-201ENSMUST00000101867 106 ntBASIC0.18□□□□□ -2.38
Cdx2P43241 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Cdx2P43241 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.18□□□□□ -2.38
Cdx2P43241 Gm27926-201ENSMUST00000157180 66 ntBASIC0.18□□□□□ -2.38
Cdx2P43241 Gm22888-201ENSMUST00000158640 77 ntBASIC0.18□□□□□ -2.38
Cdx2P43241 Gm22166-201ENSMUST00000178419 121 ntBASIC0.18□□□□□ -2.38
Cdx2P43241 Gm23288-201ENSMUST00000179213 121 ntBASIC0.18□□□□□ -2.38
Cdx2P43241 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
Cdx2P43241 Snord98-201ENSMUST00000116819 65 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm14782-201ENSMUST00000120151 195 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm25805-201ENSMUST00000122788 108 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm22983-201ENSMUST00000158308 104 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm25163-201ENSMUST00000158905 104 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm25284-201ENSMUST00000180345 141 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm37128-201ENSMUST00000192599 232 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm44010-201ENSMUST00000204432 331 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 Gm30155-201ENSMUST00000223458 339 ntBASIC0.17□□□□□ -2.38
Cdx2P43241 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Cdx2P43241 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm22786-201ENSMUST00000104086 122 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm16032-201ENSMUST00000118534 168 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm24901-201ENSMUST00000158125 110 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm25949-201ENSMUST00000175333 114 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm44948-201ENSMUST00000209050 149 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm23515-201ENSMUST00000082829 107 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Mir500-201ENSMUST00000093600 92 ntBASIC0.16□□□□□ -2.38
Cdx2P43241 Gm23013-201ENSMUST00000104146 106 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 Gm24962-201ENSMUST00000157917 109 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 Gm29640-201ENSMUST00000187972 278 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 Gm28506-201ENSMUST00000189937 150 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 Gm5001-201ENSMUST00000204361 331 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.15□□□□□ -2.39
Cdx2P43241 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Cdx2P43241 Gm22200-201ENSMUST00000158614 67 ntBASIC0.14□□□□□ -2.39
Cdx2P43241 Gm22914-201ENSMUST00000175195 77 ntBASIC0.14□□□□□ -2.39
Cdx2P43241 Gm27475-201ENSMUST00000183420 61 ntBASIC0.14□□□□□ -2.39
Cdx2P43241 Mir6365-201ENSMUST00000183990 101 ntBASIC0.14□□□□□ -2.39
Cdx2P43241 Mir7065-201ENSMUST00000185110 61 ntBASIC0.14□□□□□ -2.39
Cdx2P43241 Gm19777-201ENSMUST00000191940 358 ntBASIC0.14□□□□□ -2.39
Cdx2P43241 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
Cdx2P43241 Mir880-201ENSMUST00000104809 78 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 277.4 ms