Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col18a1P39061 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col18a1P39061 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col18a1P39061 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm14567-201ENSMUST00000117155 174 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm22129-201ENSMUST00000179034 107 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm37361-201ENSMUST00000194345 132 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm34139-201ENSMUST00000196166 294 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm44976-201ENSMUST00000205543 261 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col18a1P39061 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col18a1P39061 Gm22084-201ENSMUST00000157585 105 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col18a1P39061 Gm27443-201ENSMUST00000184660 98 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Gm18346-201ENSMUST00000216782 325 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Gm7214-201ENSMUST00000222428 272 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Gm22686-201ENSMUST00000082847 100 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.19□□□□□ -1.9
Col18a1P39061 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col18a1P39061 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col18a1P39061 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col18a1P39061 Gm24246-201ENSMUST00000157315 132 ntBASIC3.18□□□□□ -1.9
Col18a1P39061 Gm26405-201ENSMUST00000158495 100 ntBASIC3.18□□□□□ -1.9
Col18a1P39061 Gm22946-201ENSMUST00000158558 82 ntBASIC3.18□□□□□ -1.9
Col18a1P39061 Gm27415-201ENSMUST00000183720 95 ntBASIC3.18□□□□□ -1.9
Col18a1P39061 Gm38238-201ENSMUST00000194334 346 ntBASIC3.18□□□□□ -1.9
Col18a1P39061 Gm26166-201ENSMUST00000083788 107 ntBASIC3.18□□□□□ -1.9
Col18a1P39061 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col18a1P39061 Gm14215-201ENSMUST00000120578 221 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Gm26004-201ENSMUST00000158804 116 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Gm22738-201ENSMUST00000083440 147 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col18a1P39061 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col18a1P39061 Gm23713-201ENSMUST00000157353 70 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Gm22615-201ENSMUST00000158102 70 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.17□□□□□ -1.9
Col18a1P39061 Gm42719-201ENSMUST00000197393 355 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.17□□□□□ -1.9
Col18a1P39061 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Col18a1P39061 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col18a1P39061 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col18a1P39061 Gm6444-201ENSMUST00000119611 458 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Gm23349-201ENSMUST00000158432 98 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Gm43901-201ENSMUST00000203247 453 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Gm23790-201ENSMUST00000083013 107 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col18a1P39061 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
Col18a1P39061 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.16□□□□□ -1.9
Col18a1P39061 Gm24283-201ENSMUST00000104233 107 ntBASIC3.15□□□□□ -1.9
Col18a1P39061 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col18a1P39061 Gm8219-201ENSMUST00000218309 242 ntBASIC3.15□□□□□ -1.9
Col18a1P39061 Gm24625-201ENSMUST00000082622 130 ntBASIC3.15□□□□□ -1.9
Col18a1P39061 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col18a1P39061 Gm24280-201ENSMUST00000104237 134 ntBASIC3.15□□□□□ -1.91
Col18a1P39061 Gm23960-201ENSMUST00000157206 131 ntBASIC3.15□□□□□ -1.91
Col18a1P39061 Gm25910-201ENSMUST00000157620 140 ntBASIC3.15□□□□□ -1.91
Col18a1P39061 Gm24771-201ENSMUST00000158508 137 ntBASIC3.15□□□□□ -1.91
Col18a1P39061 Gm24638-201ENSMUST00000179807 132 ntBASIC3.15□□□□□ -1.91
Col18a1P39061 Gm44358-201ENSMUST00000196301 98 ntBASIC3.15□□□□□ -1.91
Col18a1P39061 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col18a1P39061 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.15□□□□□ -1.91
Col18a1P39061 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col18a1P39061 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col18a1P39061 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col18a1P39061 Gm24468-201ENSMUST00000104489 104 ntBASIC3.14□□□□□ -1.91
Col18a1P39061 Gm24716-201ENSMUST00000157524 104 ntBASIC3.14□□□□□ -1.91
Col18a1P39061 Gm25470-201ENSMUST00000175576 111 ntBASIC3.14□□□□□ -1.91
Col18a1P39061 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.14□□□□□ -1.91
Col18a1P39061 Mir222-201ENSMUST00000083537 79 ntBASIC3.14□□□□□ -1.91
Col18a1P39061 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col18a1P39061 Gm22713-201ENSMUST00000116895 130 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Gm23601-201ENSMUST00000157259 131 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Gm23898-201ENSMUST00000158111 103 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Gm23223-201ENSMUST00000158119 127 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Mir6399-201ENSMUST00000184050 84 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Gm38356-201ENSMUST00000194313 408 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.13□□□□□ -1.91
Col18a1P39061 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.13□□□□□ -1.91
Col18a1P39061 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Col18a1P39061 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Col18a1P39061 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col18a1P39061 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col18a1P39061 Gm14020-201ENSMUST00000118165 662 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm11253-201ENSMUST00000118486 201 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm12351-201ENSMUST00000118727 292 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col18a1P39061 Gm44429-201ENSMUST00000203542 186 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm44057-201ENSMUST00000204547 96 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.12□□□□□ -1.91
Col18a1P39061 Gm25789-201ENSMUST00000083294 76 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms