Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Gm25376-201ENSMUST00000104340 133 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hoxd4P10628 Gm25059-201ENSMUST00000157367 117 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Gm24277-201ENSMUST00000158661 104 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Mir7k-201ENSMUST00000184115 110 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Gm44964-201ENSMUST00000207011 273 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Hoxd4P10628 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Gm26175-201ENSMUST00000083794 131 ntBASIC2.55□□□□□ -2
Hoxd4P10628 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxd4P10628 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Hoxd4P10628 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.54□□□□□ -2
Hoxd4P10628 Gm22196-201ENSMUST00000116865 109 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm11356-201ENSMUST00000118974 192 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm13588-201ENSMUST00000120026 135 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm25323-201ENSMUST00000122555 103 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm25491-201ENSMUST00000158733 308 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm20672-201ENSMUST00000176605 261 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm8034-201ENSMUST00000178853 132 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.54□□□□□ -2
Hoxd4P10628 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.54□□□□□ -2
Hoxd4P10628 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.54□□□□□ -2
Hoxd4P10628 BC022960-201ENSMUST00000119987 1815 ntBASIC2.54□□□□□ -2
Hoxd4P10628 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Hoxd4P10628 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxd4P10628 Gm25091-201ENSMUST00000103997 71 ntBASIC2.53□□□□□ -2
Hoxd4P10628 Gm14567-201ENSMUST00000117155 174 ntBASIC2.53□□□□□ -2
Hoxd4P10628 Gm24908-201ENSMUST00000157294 127 ntBASIC2.53□□□□□ -2
Hoxd4P10628 Gm24837-201ENSMUST00000158683 81 ntBASIC2.53□□□□□ -2
Hoxd4P10628 Gm27893-201ENSMUST00000184408 194 ntBASIC2.53□□□□□ -2
Hoxd4P10628 Gm37330-201ENSMUST00000192606 153 ntBASIC2.53□□□□□ -2
Hoxd4P10628 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.53□□□□□ -2
Hoxd4P10628 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.53□□□□□ -2
Hoxd4P10628 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxd4P10628 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.53□□□□□ -2.01
Hoxd4P10628 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm23325-201ENSMUST00000157422 129 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm24436-201ENSMUST00000157889 302 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm25373-201ENSMUST00000158156 115 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm23859-201ENSMUST00000158383 64 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm25012-201ENSMUST00000158396 164 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm24878-201ENSMUST00000158782 104 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Mir6350-201ENSMUST00000183639 105 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm20058-201ENSMUST00000186939 284 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hoxd4P10628 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm44223-201ENSMUST00000204854 114 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm23615-201ENSMUST00000082602 65 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm22507-201ENSMUST00000082773 160 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gm22354-201ENSMUST00000083919 70 ntBASIC2.52□□□□□ -2.01
Hoxd4P10628 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hoxd4P10628 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hoxd4P10628 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hoxd4P10628 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hoxd4P10628 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm25407-201ENSMUST00000104102 134 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm24468-201ENSMUST00000104489 104 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Mir878-201ENSMUST00000104680 78 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm15190-201ENSMUST00000120855 276 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm22330-201ENSMUST00000158068 115 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm26215-201ENSMUST00000158584 139 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm22800-201ENSMUST00000175627 94 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm23567-201ENSMUST00000178005 107 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm44921-201ENSMUST00000205290 301 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gm45522-201ENSMUST00000210784 166 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hoxd4P10628 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Hoxd4P10628 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.51□□□□□ -2.01
Hoxd4P10628 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Hoxd4P10628 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Hoxd4P10628 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Hoxd4P10628 Mir547-201ENSMUST00000102051 78 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm22939-201ENSMUST00000103958 131 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm23668-201ENSMUST00000157465 111 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Mir7081-201ENSMUST00000184490 75 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm6801-201ENSMUST00000190697 339 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm37081-201ENSMUST00000192034 196 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Mir1291-201ENSMUST00000199842 117 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm45429-201ENSMUST00000209527 172 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm25588-201ENSMUST00000082501 140 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 Snora34-201ENSMUST00000083402 138 ntBASIC2.5□□□□□ -2.01
Hoxd4P10628 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hoxd4P10628 Gm24119-201ENSMUST00000103979 246 ntBASIC2.49□□□□□ -2.01
Hoxd4P10628 Snora36b-201ENSMUST00000104383 132 ntBASIC2.49□□□□□ -2.01
Hoxd4P10628 Gm11471-201ENSMUST00000121824 198 ntBASIC2.49□□□□□ -2.01
Hoxd4P10628 Gm25945-201ENSMUST00000122484 135 ntBASIC2.49□□□□□ -2.01
Hoxd4P10628 Gm22079-201ENSMUST00000157592 106 ntBASIC2.49□□□□□ -2.01
Hoxd4P10628 Snord93-201ENSMUST00000175580 71 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms