Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim56Q80VI1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm20438-201ENSMUST00000174441 329 ntBASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm20718-201ENSMUST00000176058 259 ntBASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm27645-201ENSMUST00000183348 77 ntBASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm27330-201ENSMUST00000184689 132 ntBASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm28912-201ENSMUST00000189001 234 ntBASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm26456-201ENSMUST00000082831 111 ntBASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim56Q80VI1 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm16171-201ENSMUST00000118004 324 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm24010-201ENSMUST00000157731 282 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm26214-201ENSMUST00000158581 107 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm25491-201ENSMUST00000158733 308 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm24390-201ENSMUST00000179578 62 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim56Q80VI1 Snord61-201ENSMUST00000083176 71 ntBASIC3.11□□□□□ -1.91
Trim56Q80VI1 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim56Q80VI1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Trim56Q80VI1 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim56Q80VI1 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm24670-201ENSMUST00000104154 132 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm25323-201ENSMUST00000122555 103 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm23043-201ENSMUST00000157890 109 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm24922-201ENSMUST00000158511 102 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm27379-201ENSMUST00000183730 123 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm37807-201ENSMUST00000194310 190 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Gm43381-201ENSMUST00000198553 165 ntBASIC3.1□□□□□ -1.91
Trim56Q80VI1 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim56Q80VI1 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Trim56Q80VI1 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.09□□□□□ -1.91
Trim56Q80VI1 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.09□□□□□ -1.91
Trim56Q80VI1 Snord100-201ENSMUST00000116836 74 ntBASIC3.09□□□□□ -1.91
Trim56Q80VI1 Gm8260-201ENSMUST00000119230 353 ntBASIC3.09□□□□□ -1.91
Trim56Q80VI1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.09□□□□□ -1.91
Trim56Q80VI1 Gm45452-201ENSMUST00000210905 177 ntBASIC3.09□□□□□ -1.91
Trim56Q80VI1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim56Q80VI1 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim56Q80VI1 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Trim56Q80VI1 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Trim56Q80VI1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim56Q80VI1 Gm25153-201ENSMUST00000157118 156 ntBASIC3.08□□□□□ -1.92
Trim56Q80VI1 Gm8508-201ENSMUST00000061226 363 ntBASIC3.08□□□□□ -1.92
Trim56Q80VI1 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.08□□□□□ -1.92
Trim56Q80VI1 Gm25825-201ENSMUST00000157091 124 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm26411-201ENSMUST00000157668 107 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm25882-201ENSMUST00000157784 85 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm26157-201ENSMUST00000158974 126 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm19257-201ENSMUST00000186121 183 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm44057-201ENSMUST00000204547 96 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm44976-201ENSMUST00000205543 261 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Gm25797-201ENSMUST00000082640 107 ntBASIC3.07□□□□□ -1.92
Trim56Q80VI1 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim56Q80VI1 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trim56Q80VI1 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim56Q80VI1 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm6954-201ENSMUST00000117416 225 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim56Q80VI1 Mir1927-201ENSMUST00000158579 109 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm38298-201ENSMUST00000193578 118 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm44223-201ENSMUST00000204854 114 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm22738-201ENSMUST00000083440 147 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm23095-201ENSMUST00000083446 107 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm26175-201ENSMUST00000083794 131 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Gm25513-201ENSMUST00000083861 162 ntBASIC3.06□□□□□ -1.92
Trim56Q80VI1 Mir878-201ENSMUST00000104680 78 ntBASIC3.05□□□□□ -1.92
Trim56Q80VI1 Mir3076-201ENSMUST00000175415 60 ntBASIC3.05□□□□□ -1.92
Trim56Q80VI1 Gm29604-201ENSMUST00000187176 163 ntBASIC3.05□□□□□ -1.92
Trim56Q80VI1 Gm25987-201ENSMUST00000083234 107 ntBASIC3.05□□□□□ -1.92
Trim56Q80VI1 Mir201-201ENSMUST00000083470 66 ntBASIC3.05□□□□□ -1.92
Trim56Q80VI1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim56Q80VI1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim56Q80VI1 Mir6405-201ENSMUST00000184584 124 ntBASIC3.04□□□□□ -1.92
Trim56Q80VI1 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.04□□□□□ -1.92
Trim56Q80VI1 Gm25130-201ENSMUST00000082650 156 ntBASIC3.04□□□□□ -1.92
Trim56Q80VI1 Mir155-201ENSMUST00000083463 65 ntBASIC3.04□□□□□ -1.92
Trim56Q80VI1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.04□□□□□ -1.92
Trim56Q80VI1 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim56Q80VI1 Mir682-201ENSMUST00000102281 96 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Mir344c-201ENSMUST00000103919 92 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Mir3092-201ENSMUST00000174954 96 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Gm27672-201ENSMUST00000183751 204 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Gm37377-201ENSMUST00000191733 304 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Gm44491-201ENSMUST00000196794 96 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Gm42719-201ENSMUST00000197393 355 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Mir7118-201ENSMUST00000197760 61 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim56Q80VI1 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.03□□□□□ -1.92
Trim56Q80VI1 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim56Q80VI1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim56Q80VI1 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm22003-201ENSMUST00000101885 107 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm23197-201ENSMUST00000158809 112 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms