Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm25634-201ENSMUST00000082667 105 ntBASIC2.57□□□□□ -2
Ddx55Q6ZPL9 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm16032-201ENSMUST00000118534 168 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm15861-201ENSMUST00000120979 339 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Mir669n-201ENSMUST00000158636 54 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm37624-201ENSMUST00000193751 219 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm44322-201ENSMUST00000196830 115 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm25820-201ENSMUST00000198589 127 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm45116-201ENSMUST00000207392 275 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ddx55Q6ZPL9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.56□□□□□ -2
Ddx55Q6ZPL9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Gm22151-201ENSMUST00000116963 58 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Gm16561-201ENSMUST00000163001 192 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Gm15235-201ENSMUST00000200572 194 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Gm20734-201ENSMUST00000216939 193 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Mir29c-201ENSMUST00000083614 88 ntBASIC2.55□□□□□ -2
Ddx55Q6ZPL9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm13801-201ENSMUST00000120750 160 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm25961-201ENSMUST00000157174 135 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm24436-201ENSMUST00000157889 302 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm25494-201ENSMUST00000158143 100 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Mir6376-201ENSMUST00000185149 131 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm18546-201ENSMUST00000197245 676 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm26204-201ENSMUST00000082906 107 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.54□□□□□ -2
Ddx55Q6ZPL9 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.53□□□□□ -2
Ddx55Q6ZPL9 Gm23983-201ENSMUST00000157142 114 ntBASIC2.53□□□□□ -2
Ddx55Q6ZPL9 Gm22553-201ENSMUST00000157797 295 ntBASIC2.53□□□□□ -2
Ddx55Q6ZPL9 Gm26482-201ENSMUST00000158015 62 ntBASIC2.53□□□□□ -2
Ddx55Q6ZPL9 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.53□□□□□ -2
Ddx55Q6ZPL9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.53□□□□□ -2
Ddx55Q6ZPL9 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ddx55Q6ZPL9 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.53□□□□□ -2
Ddx55Q6ZPL9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.53□□□□□ -2.01
Ddx55Q6ZPL9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm22051-201ENSMUST00000117002 127 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm2830-201ENSMUST00000140330 385 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm23033-201ENSMUST00000157996 134 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm22075-201ENSMUST00000158599 192 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm25051-201ENSMUST00000158602 249 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm25491-201ENSMUST00000158733 308 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm27878-201ENSMUST00000184000 106 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm6105-201ENSMUST00000200580 624 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm25636-201ENSMUST00000082666 133 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Gm24762-201ENSMUST00000083689 104 ntBASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ddx55Q6ZPL9 Mir542-201ENSMUST00000102186 85 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm25938-201ENSMUST00000104139 166 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm13913-201ENSMUST00000121126 260 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm24237-201ENSMUST00000157790 132 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm23194-201ENSMUST00000158813 105 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm24510-201ENSMUST00000174965 94 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm27285-201ENSMUST00000183875 127 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm45654-201ENSMUST00000210980 123 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm18188-201ENSMUST00000219386 478 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Mir302d-201ENSMUST00000083513 66 ntBASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Ddx55Q6ZPL9 Gm23109-201ENSMUST00000116867 126 ntBASIC2.5□□□□□ -2.01
Ddx55Q6ZPL9 Gm22551-201ENSMUST00000157795 103 ntBASIC2.5□□□□□ -2.01
Ddx55Q6ZPL9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.5□□□□□ -2.01
Ddx55Q6ZPL9 Gm25142-201ENSMUST00000082698 107 ntBASIC2.5□□□□□ -2.01
Ddx55Q6ZPL9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Ddx55Q6ZPL9 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm24098-201ENSMUST00000102075 109 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm25381-201ENSMUST00000102078 109 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm25914-201ENSMUST00000157618 153 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm25910-201ENSMUST00000157620 140 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm28344-201ENSMUST00000185704 279 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm44308-201ENSMUST00000197080 99 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm36189-201ENSMUST00000204113 523 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.49□□□□□ -2.01
Ddx55Q6ZPL9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm14748-201ENSMUST00000119819 411 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm15214-201ENSMUST00000122155 470 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm22337-201ENSMUST00000157721 132 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm23043-201ENSMUST00000157890 109 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm22731-201ENSMUST00000158086 94 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm25836-201ENSMUST00000158918 123 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm16162-201ENSMUST00000162296 297 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm27443-201ENSMUST00000184660 98 ntBASIC2.48□□□□□ -2.01
Ddx55Q6ZPL9 Gm37997-201ENSMUST00000193515 267 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms