Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm25968-201ENSMUST00000157167 100 ntBASIC0.36□□□□□ -2.35
Tpm1P58771 Gm23605-201ENSMUST00000157255 127 ntBASIC0.36□□□□□ -2.35
Tpm1P58771 Gm23898-201ENSMUST00000158111 103 ntBASIC0.36□□□□□ -2.35
Tpm1P58771 Gm20391-201ENSMUST00000174722 106 ntBASIC0.36□□□□□ -2.35
Tpm1P58771 Mir6540-201ENSMUST00000184886 108 ntBASIC0.36□□□□□ -2.35
Tpm1P58771 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
Tpm1P58771 Gm15379-201ENSMUST00000121224 648 ntBASIC0.35□□□□□ -2.35
Tpm1P58771 Gm26152-201ENSMUST00000157427 101 ntBASIC0.35□□□□□ -2.35
Tpm1P58771 Gm24963-201ENSMUST00000157916 144 ntBASIC0.35□□□□□ -2.35
Tpm1P58771 Gm22809-201ENSMUST00000082743 156 ntBASIC0.35□□□□□ -2.35
Tpm1P58771 Gm25627-201ENSMUST00000084003 153 ntBASIC0.35□□□□□ -2.35
Tpm1P58771 Gm22113-201ENSMUST00000158343 104 ntBASIC0.34□□□□□ -2.36
Tpm1P58771 Gm17148-201ENSMUST00000164702 249 ntBASIC0.34□□□□□ -2.36
Tpm1P58771 Mir6346-201ENSMUST00000183982 81 ntBASIC0.34□□□□□ -2.36
Tpm1P58771 Mir7118-201ENSMUST00000197760 61 ntBASIC0.34□□□□□ -2.36
Tpm1P58771 Gm26326-201ENSMUST00000083070 129 ntBASIC0.34□□□□□ -2.36
Tpm1P58771 Mir654-201ENSMUST00000104787 84 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm26301-201ENSMUST00000104813 95 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm16032-201ENSMUST00000118534 168 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm14766-201ENSMUST00000121689 367 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm23672-201ENSMUST00000157471 107 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm20257-202ENSMUST00000188643 130 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.33□□□□□ -2.36
Tpm1P58771 Gm25507-201ENSMUST00000116981 144 ntBASIC0.32□□□□□ -2.36
Tpm1P58771 Gm14946-201ENSMUST00000119859 296 ntBASIC0.32□□□□□ -2.36
Tpm1P58771 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.32□□□□□ -2.36
Tpm1P58771 Gm22914-201ENSMUST00000175195 77 ntBASIC0.32□□□□□ -2.36
Tpm1P58771 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.32□□□□□ -2.36
Tpm1P58771 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Tpm1P58771 Gm19777-201ENSMUST00000191940 358 ntBASIC0.32□□□□□ -2.36
Tpm1P58771 Gm24258-201ENSMUST00000083739 133 ntBASIC0.32□□□□□ -2.36
Tpm1P58771 Gm14782-201ENSMUST00000120151 195 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 Gm23212-201ENSMUST00000122718 60 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 Gm22888-201ENSMUST00000158640 77 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.31□□□□□ -2.36
Tpm1P58771 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 Gm33654-201ENSMUST00000221704 215 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.31□□□□□ -2.36
Tpm1P58771 Gm24476-201ENSMUST00000157437 131 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 Gm22447-201ENSMUST00000158155 92 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 Gm26430-201ENSMUST00000178054 107 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 Gm26335-201ENSMUST00000178449 107 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 Gm28288-201ENSMUST00000191019 214 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 Gm23969-201ENSMUST00000083324 74 ntBASIC0.3□□□□□ -2.36
Tpm1P58771 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.29□□□□□ -2.36
Tpm1P58771 Gm25949-201ENSMUST00000175333 114 ntBASIC0.29□□□□□ -2.36
Tpm1P58771 Gm27957-201ENSMUST00000184054 127 ntBASIC0.29□□□□□ -2.36
Tpm1P58771 Gm29014-201ENSMUST00000191422 326 ntBASIC0.29□□□□□ -2.36
Tpm1P58771 Gm44488-201ENSMUST00000199467 119 ntBASIC0.29□□□□□ -2.36
Tpm1P58771 Gm44948-201ENSMUST00000209050 149 ntBASIC0.29□□□□□ -2.36
Tpm1P58771 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Tpm1P58771 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Tpm1P58771 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Tpm1P58771 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Tpm1P58771 Gm22706-201ENSMUST00000157907 112 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 Gm23714-201ENSMUST00000179259 105 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 Gm25284-201ENSMUST00000180345 141 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.36
Tpm1P58771 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.36
Tpm1P58771 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.28□□□□□ -2.36
Tpm1P58771 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
Tpm1P58771 Gm25825-201ENSMUST00000157091 124 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Gm22983-201ENSMUST00000158308 104 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Gm22200-201ENSMUST00000158614 67 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Gm24487-201ENSMUST00000178017 63 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Gm22685-201ENSMUST00000082848 106 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Gm25138-201ENSMUST00000083248 136 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Mir34a-201ENSMUST00000083559 102 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Gm26108-201ENSMUST00000083973 191 ntBASIC0.27□□□□□ -2.37
Tpm1P58771 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Tpm1P58771 Gm26135-201ENSMUST00000101993 72 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Tpm1P58771 Mir880-201ENSMUST00000104809 78 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Gm25109-201ENSMUST00000122474 114 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Gm25838-201ENSMUST00000158920 120 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Snord50b-201ENSMUST00000178497 72 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Gm27656-201ENSMUST00000185055 80 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Gm29640-201ENSMUST00000187972 278 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Tpm1P58771 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Gm30155-201ENSMUST00000223458 339 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.26□□□□□ -2.37
Tpm1P58771 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.25□□□□□ -2.37
Tpm1P58771 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Tpm1P58771 Gm20462-201ENSMUST00000172623 408 ntBASIC0.24□□□□□ -2.37
Tpm1P58771 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.24□□□□□ -2.37
Tpm1P58771 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.24□□□□□ -2.37
Tpm1P58771 Gm22786-201ENSMUST00000104086 122 ntBASIC0.23□□□□□ -2.37
Tpm1P58771 Gm11798-201ENSMUST00000119150 421 ntBASIC0.23□□□□□ -2.37
Tpm1P58771 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms