Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Snord89-201ENSMUST00000104516 110 ntBASIC3.27□□□□□ -1.89
Col18a1P39061 Gm23409-201ENSMUST00000158516 237 ntBASIC3.27□□□□□ -1.89
Col18a1P39061 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.27□□□□□ -1.89
Col18a1P39061 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.27□□□□□ -1.89
Col18a1P39061 Gm22354-201ENSMUST00000083919 70 ntBASIC3.27□□□□□ -1.89
Col18a1P39061 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col18a1P39061 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col18a1P39061 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col18a1P39061 Gm25543-201ENSMUST00000122678 312 ntBASIC3.26□□□□□ -1.89
Col18a1P39061 Gm23957-201ENSMUST00000157209 90 ntBASIC3.26□□□□□ -1.89
Col18a1P39061 Gm23826-201ENSMUST00000157394 119 ntBASIC3.26□□□□□ -1.89
Col18a1P39061 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.26□□□□□ -1.89
Col18a1P39061 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col18a1P39061 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col18a1P39061 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col18a1P39061 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.26□□□□□ -1.89
Col18a1P39061 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col18a1P39061 Mir294-201ENSMUST00000104710 84 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm6025-201ENSMUST00000121517 201 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Mir6338-201ENSMUST00000183389 109 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm37431-201ENSMUST00000195102 111 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm45654-201ENSMUST00000210980 123 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.25□□□□□ -1.89
Col18a1P39061 Gm22247-201ENSMUST00000082476 131 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm23042-201ENSMUST00000083866 101 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col18a1P39061 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col18a1P39061 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col18a1P39061 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col18a1P39061 Gm13913-201ENSMUST00000121126 260 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm25460-201ENSMUST00000157954 127 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm26160-201ENSMUST00000158965 63 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm21064-202ENSMUST00000190583 278 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm44408-201ENSMUST00000200205 66 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.25□□□□□ -1.89
Col18a1P39061 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Gm22421-201ENSMUST00000083058 107 ntBASIC3.25□□□□□ -1.89
Col18a1P39061 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Col18a1P39061 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col18a1P39061 Gm37895-201ENSMUST00000192448 4550 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col18a1P39061 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col18a1P39061 Gm12238-201ENSMUST00000127764 124 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Mir1942-201ENSMUST00000157274 63 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Gm23101-201ENSMUST00000157550 137 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Gm23761-201ENSMUST00000158347 104 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Gm27934-201ENSMUST00000158795 63 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Mir186-201ENSMUST00000083497 71 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.24□□□□□ -1.89
Col18a1P39061 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col18a1P39061 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col18a1P39061 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col18a1P39061 Gm24913-201ENSMUST00000157286 107 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm26411-201ENSMUST00000157668 107 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm26187-201ENSMUST00000157693 101 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm23476-201ENSMUST00000158881 274 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col18a1P39061 Gm37281-201ENSMUST00000192412 439 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm37330-201ENSMUST00000192606 153 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col18a1P39061 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col18a1P39061 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col18a1P39061 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col18a1P39061 Gm24593-201ENSMUST00000122507 106 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm24440-201ENSMUST00000157236 63 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm22586-201ENSMUST00000157507 122 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm24718-201ENSMUST00000157521 136 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm16111-201ENSMUST00000162128 285 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm24512-201ENSMUST00000174963 65 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm23415-201ENSMUST00000175519 83 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col18a1P39061 Gm29167-201ENSMUST00000190024 377 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.23□□□□□ -1.89
Col18a1P39061 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col18a1P39061 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col18a1P39061 Gm22196-201ENSMUST00000116865 109 ntBASIC3.22□□□□□ -1.89
Col18a1P39061 Gm24948-201ENSMUST00000082866 207 ntBASIC3.22□□□□□ -1.89
Col18a1P39061 Gm26168-201ENSMUST00000083787 112 ntBASIC3.22□□□□□ -1.89
Col18a1P39061 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col18a1P39061 Gm13314-201ENSMUST00000118742 335 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Gm24379-201ENSMUST00000122695 86 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Gm23043-201ENSMUST00000157890 109 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Gm24959-201ENSMUST00000157924 146 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Snord53-201ENSMUST00000175146 78 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Gm23056-201ENSMUST00000082803 111 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Gm24355-201ENSMUST00000082858 122 ntBASIC3.21□□□□□ -1.9
Col18a1P39061 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col18a1P39061 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col18a1P39061 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm15289-201ENSMUST00000117793 244 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm22790-201ENSMUST00000157229 129 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm27271-201ENSMUST00000183509 170 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm18665-201ENSMUST00000189783 270 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Gm43925-201ENSMUST00000203498 206 ntBASIC3.2□□□□□ -1.9
Col18a1P39061 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col18a1P39061 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms