Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.61□□□□□ -1.99
Hoxd4P10628 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.61□□□□□ -1.99
Hoxd4P10628 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.61□□□□□ -1.99
Hoxd4P10628 Mir137-201ENSMUST00000083635 73 ntBASIC2.61□□□□□ -1.99
Hoxd4P10628 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxd4P10628 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxd4P10628 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.61□□□□□ -1.99
Hoxd4P10628 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Hoxd4P10628 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Hoxd4P10628 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxd4P10628 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Mir499-201ENSMUST00000102357 79 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm14502-201ENSMUST00000118154 113 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm11285-201ENSMUST00000118443 322 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm12513-201ENSMUST00000118617 352 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm25625-201ENSMUST00000157221 96 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm23194-201ENSMUST00000158813 105 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm27700-201ENSMUST00000185003 81 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm29602-201ENSMUST00000186887 442 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm6060-201ENSMUST00000188671 251 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm28912-201ENSMUST00000189001 234 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm37085-201ENSMUST00000193780 196 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.6□□□□□ -1.99
Hoxd4P10628 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Hoxd4P10628 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Hoxd4P10628 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hoxd4P10628 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm25728-201ENSMUST00000104525 159 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Snord100-201ENSMUST00000116836 74 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm15289-201ENSMUST00000117793 244 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm23886-201ENSMUST00000122684 313 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm22382-201ENSMUST00000158185 130 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Mir28b-201ENSMUST00000175399 80 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm26466-201ENSMUST00000179615 79 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm27869-201ENSMUST00000184327 122 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm22454-201ENSMUST00000082583 107 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Gm23509-201ENSMUST00000083080 160 ntBASIC2.59□□□□□ -1.99
Hoxd4P10628 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hoxd4P10628 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -2
Hoxd4P10628 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.59□□□□□ -2
Hoxd4P10628 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Hoxd4P10628 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hoxd4P10628 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Gm11598-201ENSMUST00000119257 357 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Gm25289-201ENSMUST00000122799 119 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Gm25367-201ENSMUST00000158846 106 ntBASIC2.58□□□□□ -2
Hoxd4P10628 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Mir3083-201ENSMUST00000175377 64 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Mir5123-201ENSMUST00000177794 83 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Mir6386-201ENSMUST00000183558 104 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Mir7667-201ENSMUST00000183866 63 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Gm28169-201ENSMUST00000190342 345 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Gm37377-201ENSMUST00000191733 304 ntBASIC2.58□□□□□ -2
Hoxd4P10628 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.58□□□□□ -2
Hoxd4P10628 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hoxd4P10628 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hoxd4P10628 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hoxd4P10628 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hoxd4P10628 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Hoxd4P10628 Gm23747-201ENSMUST00000104228 131 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm22486-201ENSMUST00000116815 137 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm22193-201ENSMUST00000116868 76 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm14923-201ENSMUST00000118270 155 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm14568-201ENSMUST00000119321 294 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm16533-201ENSMUST00000140035 228 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm22228-201ENSMUST00000157364 101 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm23253-201ENSMUST00000157441 104 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm24846-201ENSMUST00000158033 108 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm4468-201ENSMUST00000170206 294 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Snord53-201ENSMUST00000175146 78 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.57□□□□□ -2
Hoxd4P10628 Gm10025-201ENSMUST00000079568 372 ntBASIC2.57□□□□□ -2
Hoxd4P10628 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hoxd4P10628 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxd4P10628 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hoxd4P10628 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxd4P10628 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxd4P10628 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxd4P10628 Mir466l-201ENSMUST00000104866 121 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Gm12213-201ENSMUST00000119924 353 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Gm25828-201ENSMUST00000157087 95 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Gm23559-201ENSMUST00000157824 103 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Gm23665-201ENSMUST00000158054 62 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.56□□□□□ -2
Hoxd4P10628 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.56□□□□□ -2
Hoxd4P10628 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Gm25589-201ENSMUST00000082502 166 ntBASIC2.56□□□□□ -2
Hoxd4P10628 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxd4P10628 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms