Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm24277-201ENSMUST00000158661 104 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm25671-201ENSMUST00000178612 105 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm23307-201ENSMUST00000179167 105 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm25286-201ENSMUST00000179790 105 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm28408-201ENSMUST00000191557 463 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm37089-201ENSMUST00000195616 129 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Gm19855-201ENSMUST00000210145 249 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Mir410-201ENSMUST00000083563 81 ntBASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Lrif1Q8CDD9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm23836-201ENSMUST00000104434 129 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm12785-201ENSMUST00000122052 172 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm23779-201ENSMUST00000157938 64 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Mir7675-201ENSMUST00000184262 58 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm22364-201ENSMUST00000083097 98 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Mir211-201ENSMUST00000083651 106 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.25□□□□□ -2.21
Lrif1Q8CDD9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Gm37338-201ENSMUST00000191986 127 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Gm45207-201ENSMUST00000207469 145 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Gm24966-201ENSMUST00000082443 79 ntBASIC1.24□□□□□ -2.21
Lrif1Q8CDD9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm23907-201ENSMUST00000104595 189 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm14307-201ENSMUST00000118930 291 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm11572-201ENSMUST00000119164 120 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm14297-201ENSMUST00000129110 291 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm16362-201ENSMUST00000135189 214 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm23262-201ENSMUST00000158323 168 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm25450-201ENSMUST00000179144 107 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm28409-201ENSMUST00000187064 103 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm44473-201ENSMUST00000204039 152 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm45543-201ENSMUST00000209327 88 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm23055-201ENSMUST00000082805 94 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm23412-201ENSMUST00000083017 107 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm22294-201ENSMUST00000083308 104 ntBASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
Lrif1Q8CDD9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Gm15214-201ENSMUST00000122155 470 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Gm25284-201ENSMUST00000180345 141 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Gm27540-201ENSMUST00000184950 187 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Gm10264-201ENSMUST00000220589 429 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Gm25078-201ENSMUST00000082530 107 ntBASIC1.22□□□□□ -2.21
Lrif1Q8CDD9 Mir343-201ENSMUST00000102360 75 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Gm24116-201ENSMUST00000103975 107 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Gm14298-201ENSMUST00000139032 237 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Gm16356-201ENSMUST00000143300 169 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Traj60-201ENSMUST00000167781 54 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Gm24038-201ENSMUST00000082872 159 ntBASIC1.21□□□□□ -2.22
Lrif1Q8CDD9 Gm12647-201ENSMUST00000118977 265 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm11834-201ENSMUST00000122257 585 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm37313-201ENSMUST00000191673 290 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.2□□□□□ -2.22
Lrif1Q8CDD9 Gm26135-201ENSMUST00000101993 72 ntBASIC1.19□□□□□ -2.22
Lrif1Q8CDD9 Gm13967-201ENSMUST00000120404 380 ntBASIC1.19□□□□□ -2.22
Lrif1Q8CDD9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.19□□□□□ -2.22
Lrif1Q8CDD9 Gm22215-201ENSMUST00000157558 96 ntBASIC1.19□□□□□ -2.22
Lrif1Q8CDD9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.19□□□□□ -2.22
Lrif1Q8CDD9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
Lrif1Q8CDD9 Gm7958-201ENSMUST00000178255 468 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms