Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm27723-201ENSMUST00000157398 63 ntBASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 Gm26468-201ENSMUST00000158644 106 ntBASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 Gm28453-203ENSMUST00000187041 189 ntBASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 Gm37338-201ENSMUST00000191986 127 ntBASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.71□□□□□ -2.14
Smchd1Q6P5D8 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm24049-201ENSMUST00000102409 100 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm12686-201ENSMUST00000120546 397 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm20257-202ENSMUST00000188643 130 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm44490-201ENSMUST00000198566 127 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm44989-201ENSMUST00000204749 217 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm24355-201ENSMUST00000082858 122 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Snord118-201ENSMUST00000082965 135 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.7□□□□□ -2.14
Smchd1Q6P5D8 Gm24390-201ENSMUST00000179578 62 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Gm24304-201ENSMUST00000177635 107 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Mir1291-201ENSMUST00000199842 117 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Gm45456-201ENSMUST00000210841 243 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Snora34-201ENSMUST00000083402 138 ntBASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Smchd1Q6P5D8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm14894-201ENSMUST00000117170 270 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm24510-201ENSMUST00000174965 94 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm25958-201ENSMUST00000175114 71 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm7950-201ENSMUST00000179633 468 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Mir6351-201ENSMUST00000183826 99 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm37449-201ENSMUST00000193016 270 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm32175-201ENSMUST00000193641 346 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm18658-201ENSMUST00000195558 270 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Mir376a-201ENSMUST00000197584 68 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.68□□□□□ -2.14
Smchd1Q6P5D8 Gm12417-201ENSMUST00000119153 403 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm14883-201ENSMUST00000120179 157 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm15861-201ENSMUST00000120979 339 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm14491-201ENSMUST00000121919 199 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm24630-201ENSMUST00000122768 106 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm23122-201ENSMUST00000157645 103 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm23083-201ENSMUST00000157851 116 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Mir6379-201ENSMUST00000183392 115 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm22537-201ENSMUST00000158172 199 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm20438-201ENSMUST00000174441 329 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm7958-201ENSMUST00000178255 468 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm22510-201ENSMUST00000179304 79 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm26336-201ENSMUST00000179449 79 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm26390-201ENSMUST00000179628 79 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Mir448-201ENSMUST00000083516 112 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.67□□□□□ -2.14
Smchd1Q6P5D8 Gm28058-201ENSMUST00000186421 264 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Gm25930-201ENSMUST00000082785 107 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Gm26135-201ENSMUST00000101993 72 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Gm22228-201ENSMUST00000157364 101 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Gm24277-201ENSMUST00000158661 104 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Snord50b-201ENSMUST00000178497 72 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Gm38019-201ENSMUST00000195133 380 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Gm26495-201ENSMUST00000083152 137 ntBASIC1.66□□□□□ -2.14
Smchd1Q6P5D8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Gm26479-201ENSMUST00000122620 106 ntBASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Snora15-201ENSMUST00000177461 131 ntBASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Mir6540-201ENSMUST00000184886 108 ntBASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Gm29308-201ENSMUST00000188863 315 ntBASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Mir6962-201ENSMUST00000199512 63 ntBASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Gm24966-201ENSMUST00000082443 79 ntBASIC1.65□□□□□ -2.15
Smchd1Q6P5D8 Gm11794-201ENSMUST00000119446 237 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 Gm25115-201ENSMUST00000157187 140 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 Gm22279-201ENSMUST00000157200 93 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 Gm27248-201ENSMUST00000184004 166 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 Gm42960-201ENSMUST00000202160 241 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.64□□□□□ -2.15
Smchd1Q6P5D8 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 200.6 ms