Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm26283-201ENSMUST00000178625 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm25452-201ENSMUST00000178776 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm23286-201ENSMUST00000178963 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm22640-201ENSMUST00000179035 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm25984-201ENSMUST00000179129 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm25585-201ENSMUST00000179469 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm26374-201ENSMUST00000179737 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm24040-201ENSMUST00000179786 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm25017-201ENSMUST00000179805 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm23618-201ENSMUST00000179912 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm26284-201ENSMUST00000180107 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm24570-201ENSMUST00000180314 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm24654-201ENSMUST00000180315 79 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Gm43602-201ENSMUST00000196772 300 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Limch1Q3UH68 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.35□□□□□ -1.87
Limch1Q3UH68 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Limch1Q3UH68 Mir374b-201ENSMUST00000102314 95 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Gm24234-201ENSMUST00000104316 107 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Gm23911-201ENSMUST00000104596 134 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Mir7050-201ENSMUST00000184636 60 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Snord61-201ENSMUST00000083176 71 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Gm26126-201ENSMUST00000083188 164 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Limch1Q3UH68 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.34□□□□□ -1.87
Limch1Q3UH68 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Limch1Q3UH68 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Limch1Q3UH68 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Limch1Q3UH68 Gm25270-201ENSMUST00000122606 138 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm24916-201ENSMUST00000157287 79 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm22221-201ENSMUST00000157362 103 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm22141-201ENSMUST00000157403 277 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm21064-202ENSMUST00000190583 278 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm44526-201ENSMUST00000204664 121 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.33□□□□□ -1.88
Limch1Q3UH68 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm25466-201ENSMUST00000103995 132 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm24126-201ENSMUST00000104111 106 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm12954-201ENSMUST00000118610 611 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm24598-201ENSMUST00000122510 74 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.32□□□□□ -1.88
Limch1Q3UH68 Snord11-201ENSMUST00000158468 84 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm22853-201ENSMUST00000174974 131 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Snord93-201ENSMUST00000175580 71 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm29604-201ENSMUST00000187176 163 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm28912-201ENSMUST00000189001 234 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm28169-201ENSMUST00000190342 345 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm44326-201ENSMUST00000198226 101 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm45288-201ENSMUST00000210236 151 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm45456-201ENSMUST00000210841 243 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm25797-201ENSMUST00000082640 107 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.32□□□□□ -1.88
Limch1Q3UH68 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm23015-201ENSMUST00000104145 128 ntBASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm13862-201ENSMUST00000121220 197 ntBASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm23381-201ENSMUST00000157676 94 ntBASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm23858-201ENSMUST00000158384 106 ntBASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Mir3103-201ENSMUST00000175474 67 ntBASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm24615-201ENSMUST00000083268 113 ntBASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Limch1Q3UH68 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Limch1Q3UH68 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm24510-201ENSMUST00000174965 94 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm24813-201ENSMUST00000175310 84 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm24573-201ENSMUST00000175499 112 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm43381-201ENSMUST00000198553 165 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm44666-201ENSMUST00000208544 391 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm22509-201ENSMUST00000082775 107 ntBASIC3.3□□□□□ -1.88
Limch1Q3UH68 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Limch1Q3UH68 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Limch1Q3UH68 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Limch1Q3UH68 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Limch1Q3UH68 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Limch1Q3UH68 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Limch1Q3UH68 Mir344c-201ENSMUST00000103919 92 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm15272-201ENSMUST00000120865 233 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm25882-201ENSMUST00000157784 85 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm25488-201ENSMUST00000158728 118 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm23268-201ENSMUST00000175494 78 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm43521-201ENSMUST00000197838 255 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm43107-201ENSMUST00000198729 255 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm43898-201ENSMUST00000204456 424 ntBASIC3.29□□□□□ -1.88
Limch1Q3UH68 Gm44976-201ENSMUST00000205543 261 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms