Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm2962-201ENSMUST00000159266 336 ntBASIC2.12□□□□□ -2.07
Hmgb1P63158 Mir6951-201ENSMUST00000183910 75 ntBASIC2.12□□□□□ -2.07
Hmgb1P63158 Mir7675-201ENSMUST00000184262 58 ntBASIC2.12□□□□□ -2.07
Hmgb1P63158 Gm27443-201ENSMUST00000184660 98 ntBASIC2.12□□□□□ -2.07
Hmgb1P63158 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.12□□□□□ -2.07
Hmgb1P63158 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmgb1P63158 Gm25090-201ENSMUST00000104000 132 ntBASIC2.11□□□□□ -2.07
Hmgb1P63158 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.11□□□□□ -2.07
Hmgb1P63158 Gm12941-201ENSMUST00000117934 220 ntBASIC2.11□□□□□ -2.07
Hmgb1P63158 Gm28579-201ENSMUST00000186143 369 ntBASIC2.11□□□□□ -2.07
Hmgb1P63158 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.11□□□□□ -2.07
Hmgb1P63158 Gm22248-201ENSMUST00000082482 150 ntBASIC2.11□□□□□ -2.07
Hmgb1P63158 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Hmgb1P63158 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Hmgb1P63158 Gm23907-201ENSMUST00000104595 189 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Mir344e-201ENSMUST00000104677 66 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Gm25318-201ENSMUST00000122554 314 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Gm22491-201ENSMUST00000157190 102 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Mir1951-201ENSMUST00000157981 89 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Gm26038-201ENSMUST00000158151 106 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.1□□□□□ -2.07
Hmgb1P63158 Gm42774-201ENSMUST00000198854 283 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.1□□□□□ -2.07
Hmgb1P63158 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.09□□□□□ -2.07
Hmgb1P63158 Gm25495-201ENSMUST00000104431 131 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Gm14491-201ENSMUST00000121919 199 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Traj60-201ENSMUST00000167781 54 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Mir6379-201ENSMUST00000183392 115 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Gm42594-201ENSMUST00000199511 246 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Gm45013-201ENSMUST00000206883 178 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Gm26447-201ENSMUST00000082448 129 ntBASIC2.09□□□□□ -2.07
Hmgb1P63158 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.09□□□□□ -2.08
Hmgb1P63158 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Hmgb1P63158 Gm15213-201ENSMUST00000122098 216 ntBASIC2.08□□□□□ -2.08
Hmgb1P63158 Gm24478-201ENSMUST00000157439 158 ntBASIC2.08□□□□□ -2.08
Hmgb1P63158 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Hmgb1P63158 Mir6901-201ENSMUST00000185062 62 ntBASIC2.08□□□□□ -2.08
Hmgb1P63158 Gm38060-201ENSMUST00000194822 464 ntBASIC2.08□□□□□ -2.08
Hmgb1P63158 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.08□□□□□ -2.08
Hmgb1P63158 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Hmgb1P63158 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Hmgb1P63158 Gm13339-201ENSMUST00000120651 510 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm22321-201ENSMUST00000157152 104 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm23536-201ENSMUST00000157541 134 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm23391-201ENSMUST00000157579 104 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm23182-201ENSMUST00000158688 135 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm28661-201ENSMUST00000188231 681 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm34015-201ENSMUST00000194908 451 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.07□□□□□ -2.08
Hmgb1P63158 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Hmgb1P63158 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm25168-201ENSMUST00000104189 132 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm23982-201ENSMUST00000157141 106 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm23640-201ENSMUST00000157860 104 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm25051-201ENSMUST00000158602 249 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm22862-201ENSMUST00000178593 121 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Mir7081-201ENSMUST00000184490 75 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm27544-201ENSMUST00000185069 155 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm45616-201ENSMUST00000211711 319 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.06□□□□□ -2.08
Hmgb1P63158 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Hmgb1P63158 Gm22242-201ENSMUST00000175224 118 ntBASIC2.05□□□□□ -2.08
Hmgb1P63158 Gm45673-201ENSMUST00000210293 358 ntBASIC2.05□□□□□ -2.08
Hmgb1P63158 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.05□□□□□ -2.08
Hmgb1P63158 Snord96a-201ENSMUST00000082791 81 ntBASIC2.05□□□□□ -2.08
Hmgb1P63158 Gm26495-201ENSMUST00000083152 137 ntBASIC2.05□□□□□ -2.08
Hmgb1P63158 Gm23039-201ENSMUST00000083870 161 ntBASIC2.05□□□□□ -2.08
Hmgb1P63158 Gm25759-201ENSMUST00000103988 129 ntBASIC2.04□□□□□ -2.08
Hmgb1P63158 Gm11792-201ENSMUST00000120640 168 ntBASIC2.04□□□□□ -2.08
Hmgb1P63158 Gm15214-201ENSMUST00000122155 470 ntBASIC2.04□□□□□ -2.08
Hmgb1P63158 Gm25392-201ENSMUST00000157335 297 ntBASIC2.04□□□□□ -2.08
Hmgb1P63158 Gm23705-201ENSMUST00000104370 130 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 Gm22479-201ENSMUST00000122566 81 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 Gm23277-201ENSMUST00000157914 136 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 Gm24656-201ENSMUST00000177548 132 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 Gm44325-201ENSMUST00000196757 77 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.03□□□□□ -2.08
Hmgb1P63158 Gm23551-201ENSMUST00000116852 121 ntBASIC2.02□□□□□ -2.09
Hmgb1P63158 Gm11857-201ENSMUST00000119817 324 ntBASIC2.02□□□□□ -2.09
Hmgb1P63158 Gm26479-201ENSMUST00000122620 106 ntBASIC2.02□□□□□ -2.09
Hmgb1P63158 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.02□□□□□ -2.09
Hmgb1P63158 Gm22448-201ENSMUST00000179254 107 ntBASIC2.02□□□□□ -2.09
Hmgb1P63158 Gm28016-201ENSMUST00000184594 196 ntBASIC2.02□□□□□ -2.09
Hmgb1P63158 Gm26077-201ENSMUST00000104064 123 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm24068-201ENSMUST00000104513 132 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm12449-201ENSMUST00000117572 234 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm24595-201ENSMUST00000122501 110 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm24724-201ENSMUST00000158230 107 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm22164-201ENSMUST00000158413 106 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm25697-201ENSMUST00000082902 98 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm24764-201ENSMUST00000083686 199 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.01□□□□□ -2.09
Hmgb1P63158 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 164.9 ms