Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23980-201ENSMUST00000157135 158 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm24690-201ENSMUST00000157759 97 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm22612-201ENSMUST00000158293 101 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm28500-201ENSMUST00000190286 151 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm43955-201ENSMUST00000204332 142 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.33□□□□□ -1.88
Col18a1P39061 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col18a1P39061 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col18a1P39061 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col18a1P39061 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col18a1P39061 Neat1-201ENSMUST00000173672 20771 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm24232-201ENSMUST00000104314 132 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm23492-201ENSMUST00000116837 115 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm15714-201ENSMUST00000117168 250 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm22378-201ENSMUST00000157481 111 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm25220-201ENSMUST00000157546 95 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm26360-201ENSMUST00000158872 103 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.33□□□□□ -1.88
Col18a1P39061 Gm37923-201ENSMUST00000191624 161 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col18a1P39061 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col18a1P39061 Gm23772-201ENSMUST00000104433 102 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 Gm25544-201ENSMUST00000122676 120 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 Gm26171-201ENSMUST00000158422 131 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 Gm23504-201ENSMUST00000158988 95 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 Gm18956-201ENSMUST00000192857 480 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 Gm24203-201ENSMUST00000082949 114 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.32□□□□□ -1.88
Col18a1P39061 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col18a1P39061 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col18a1P39061 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 Gm26091-201ENSMUST00000122704 82 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 Gm24212-201ENSMUST00000158258 132 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.31□□□□□ -1.88
Col18a1P39061 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 Gm25257-201ENSMUST00000083907 110 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.31□□□□□ -1.88
Col18a1P39061 Gm25112-201ENSMUST00000122680 104 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 n-R5s159-201ENSMUST00000122681 120 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm23641-201ENSMUST00000157857 101 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Mir8106-201ENSMUST00000184520 139 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm42834-201ENSMUST00000196845 256 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm40810-201ENSMUST00000219149 253 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm24282-201ENSMUST00000104232 66 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm13862-201ENSMUST00000121220 197 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm14629-201ENSMUST00000122428 144 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm23599-201ENSMUST00000157261 251 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm22850-201ENSMUST00000157714 82 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm24552-201ENSMUST00000158646 103 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm44352-201ENSMUST00000196358 110 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Gm44524-201ENSMUST00000203899 271 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.3□□□□□ -1.88
Col18a1P39061 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col18a1P39061 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col18a1P39061 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.29□□□□□ -1.88
Col18a1P39061 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col18a1P39061 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col18a1P39061 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.29□□□□□ -1.88
Col18a1P39061 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col18a1P39061 Gm17113-201ENSMUST00000170118 171 ntBASIC3.29□□□□□ -1.88
Col18a1P39061 Trbv18-201ENSMUST00000194256 294 ntBASIC3.29□□□□□ -1.88
Col18a1P39061 Gm16976-205ENSMUST00000227324 226 ntBASIC3.29□□□□□ -1.88
Col18a1P39061 Gm24163-201ENSMUST00000093660 132 ntBASIC3.29□□□□□ -1.88
Col18a1P39061 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col18a1P39061 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.29□□□□□ -1.88
Col18a1P39061 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col18a1P39061 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col18a1P39061 Gm26253-201ENSMUST00000122493 103 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC3.28□□□□□ -1.88
Col18a1P39061 Gm17067-202ENSMUST00000180131 123 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 Gm29553-201ENSMUST00000189692 279 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 Gm37116-201ENSMUST00000195161 147 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 Gm18546-201ENSMUST00000197245 676 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.28□□□□□ -1.88
Col18a1P39061 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Col18a1P39061 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col18a1P39061 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col18a1P39061 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Col18a1P39061 Gm11367-201ENSMUST00000117802 120 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm15861-201ENSMUST00000120979 339 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm23655-201ENSMUST00000122627 105 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm22228-201ENSMUST00000157364 101 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm7592-201ENSMUST00000160674 627 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm17161-201ENSMUST00000169187 524 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.28□□□□□ -1.89
Col18a1P39061 Gm23453-201ENSMUST00000083326 106 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 Gm24261-201ENSMUST00000083744 104 ntBASIC3.28□□□□□ -1.89
Col18a1P39061 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Col18a1P39061 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col18a1P39061 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col18a1P39061 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.27□□□□□ -1.89
Col18a1P39061 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.27□□□□□ -1.89
Col18a1P39061 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col18a1P39061 Gm26077-201ENSMUST00000104064 123 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms