Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC-0.38□□□□□ -2.47
Col6a3E9PWQ3 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm12433-201ENSMUST00000119659 255 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm24390-201ENSMUST00000179578 62 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm44377-201ENSMUST00000199039 87 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 AC159203.2-201ENSMUST00000221326 193 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm24536-201ENSMUST00000083144 107 ntBASIC-0.39□□□□□ -2.47
Col6a3E9PWQ3 Gm14517-201ENSMUST00000119040 337 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm25357-201ENSMUST00000082745 72 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm13603-201ENSMUST00000119404 83 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm28241-201ENSMUST00000190916 235 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm18747-201ENSMUST00000198129 648 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm45247-201ENSMUST00000210757 309 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 AC154552.7-201ENSMUST00000222824 156 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 AC154562.1-201ENSMUST00000226140 966 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm24977-201ENSMUST00000083106 163 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm44560-201ENSMUST00000207816 3115 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Gm5010-201ENSMUST00000213131 260 ntBASIC-0.4□□□□□ -2.47
Col6a3E9PWQ3 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Gm22226-201ENSMUST00000157355 109 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Gm37743-201ENSMUST00000194645 376 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 AC156560.1-201ENSMUST00000221425 256 ntBASIC-0.41□□□□□ -2.47
Col6a3E9PWQ3 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC-0.41□□□□□ -2.48
Col6a3E9PWQ3 Gm25457-201ENSMUST00000179509 107 ntBASIC-0.41□□□□□ -2.48
Col6a3E9PWQ3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC-0.41□□□□□ -2.48
Col6a3E9PWQ3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC-0.41□□□□□ -2.48
Col6a3E9PWQ3 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.41□□□□□ -2.48
Col6a3E9PWQ3 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm14887-201ENSMUST00000119522 663 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm25956-201ENSMUST00000175115 217 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm26189-201ENSMUST00000179879 107 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm23637-201ENSMUST00000175075 94 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm7495-201ENSMUST00000215099 426 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.42□□□□□ -2.48
Col6a3E9PWQ3 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm20415-201ENSMUST00000172877 423 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm24264-201ENSMUST00000179835 94 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm29216-201ENSMUST00000187117 492 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm44391-201ENSMUST00000198490 93 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 AC113305.1-201ENSMUST00000214664 724 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm12044-201ENSMUST00000120335 213 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm25059-201ENSMUST00000157367 117 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm26355-201ENSMUST00000158220 105 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm25898-201ENSMUST00000158303 106 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm2829-201ENSMUST00000213121 499 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 AC140477.1-201ENSMUST00000222354 246 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 AC168056.1-201ENSMUST00000225270 180 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.43□□□□□ -2.48
Col6a3E9PWQ3 Gm5899-201ENSMUST00000071770 270 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 201.4 ms