Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm10172-201ENSMUST00000085929 558 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim56Q80VI1 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim56Q80VI1 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm22935-201ENSMUST00000103960 104 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm24126-201ENSMUST00000104111 106 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Snord90-201ENSMUST00000104568 111 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm23718-201ENSMUST00000157350 307 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm25373-201ENSMUST00000158156 115 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Snord11-201ENSMUST00000158468 84 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm22853-201ENSMUST00000174974 131 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm22775-201ENSMUST00000177630 120 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm24304-201ENSMUST00000177635 107 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm23569-201ENSMUST00000180120 120 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm27505-201ENSMUST00000185071 110 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm37116-201ENSMUST00000195161 147 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm34314-201ENSMUST00000203622 367 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.25□□□□□ -1.89
Trim56Q80VI1 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim56Q80VI1 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim56Q80VI1 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm23772-201ENSMUST00000104433 102 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm12213-201ENSMUST00000119924 353 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm13560-201ENSMUST00000121865 329 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm24595-201ENSMUST00000122501 110 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm24598-201ENSMUST00000122510 74 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm25888-201ENSMUST00000157778 302 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm24958-201ENSMUST00000158009 97 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Mir3965-201ENSMUST00000175570 69 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm37545-201ENSMUST00000186512 148 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm4945-201ENSMUST00000075152 453 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm26458-201ENSMUST00000082832 128 ntBASIC3.24□□□□□ -1.89
Trim56Q80VI1 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim56Q80VI1 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim56Q80VI1 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm24122-201ENSMUST00000104107 132 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm23128-201ENSMUST00000104257 132 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm14536-201ENSMUST00000118324 138 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm12954-201ENSMUST00000118610 611 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm15027-201ENSMUST00000120922 138 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm26277-201ENSMUST00000157097 152 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm26049-201ENSMUST00000157313 108 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm23324-201ENSMUST00000157421 131 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm26088-201ENSMUST00000157896 131 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm26360-201ENSMUST00000158872 103 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm23128-202ENSMUST00000196578 133 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm44399-201ENSMUST00000205043 226 ntBASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim56Q80VI1 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim56Q80VI1 Gm13862-201ENSMUST00000121220 197 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm22221-201ENSMUST00000157362 103 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm23381-201ENSMUST00000157676 94 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm6801-201ENSMUST00000190697 339 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm37796-201ENSMUST00000195327 134 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm45492-201ENSMUST00000211611 288 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm25815-201ENSMUST00000082755 107 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Gm26126-201ENSMUST00000083188 164 ntBASIC3.22□□□□□ -1.89
Trim56Q80VI1 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim56Q80VI1 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim56Q80VI1 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
Trim56Q80VI1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm24232-201ENSMUST00000104314 132 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm14626-201ENSMUST00000117619 216 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm25488-201ENSMUST00000158728 118 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm27698-201ENSMUST00000184060 249 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm38364-201ENSMUST00000191814 179 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm9251-201ENSMUST00000197202 628 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm44052-201ENSMUST00000203382 396 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm44666-201ENSMUST00000208544 391 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm19563-201ENSMUST00000222031 270 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm22681-201ENSMUST00000083853 106 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.21□□□□□ -1.9
Trim56Q80VI1 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.2□□□□□ -1.9
Trim56Q80VI1 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Trim56Q80VI1 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.2□□□□□ -1.9
Trim56Q80VI1 Mir466k-201ENSMUST00000116774 122 ntBASIC3.2□□□□□ -1.9
Trim56Q80VI1 Gm24717-201ENSMUST00000157522 124 ntBASIC3.2□□□□□ -1.9
Trim56Q80VI1 Gm22330-201ENSMUST00000158068 115 ntBASIC3.2□□□□□ -1.9
Trim56Q80VI1 Gm43264-201ENSMUST00000202284 325 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 160.8 ms