Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm26175-201ENSMUST00000083794 131 ntBASIC3.4□□□□□ -1.87
Col18a1P39061 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col18a1P39061 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col18a1P39061 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col18a1P39061 Gm23237-201ENSMUST00000104639 92 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 Gm25633-201ENSMUST00000178565 107 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 Gm45543-201ENSMUST00000209327 88 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.39□□□□□ -1.87
Col18a1P39061 Gm22805-201ENSMUST00000082739 107 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 Gm23738-201ENSMUST00000082828 171 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col18a1P39061 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.39□□□□□ -1.87
Col18a1P39061 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm22031-201ENSMUST00000116945 126 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm11644-201ENSMUST00000119735 150 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm25283-201ENSMUST00000157272 77 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm22330-201ENSMUST00000158068 115 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm22075-201ENSMUST00000158599 192 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Mir669n-201ENSMUST00000158636 54 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm25367-201ENSMUST00000158846 106 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col18a1P39061 Gm44337-201ENSMUST00000196553 114 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col18a1P39061 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 BC051076-202ENSMUST00000199477 2868 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm26387-201ENSMUST00000104238 132 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm3852-201ENSMUST00000182781 264 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Gm25705-201ENSMUST00000083119 104 ntBASIC3.38□□□□□ -1.87
Col18a1P39061 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
Col18a1P39061 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col18a1P39061 Gm23013-201ENSMUST00000104146 106 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Gm23010-201ENSMUST00000104151 126 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Gm12213-201ENSMUST00000119924 353 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.37□□□□□ -1.87
Col18a1P39061 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.37□□□□□ -1.87
Col18a1P39061 Gm45791-201ENSMUST00000212908 352 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Gm25797-201ENSMUST00000082640 107 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Gm25651-201ENSMUST00000083782 119 ntBASIC3.37□□□□□ -1.87
Col18a1P39061 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col18a1P39061 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col18a1P39061 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col18a1P39061 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col18a1P39061 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col18a1P39061 Gm23907-201ENSMUST00000104595 189 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm25289-201ENSMUST00000122799 119 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm24747-201ENSMUST00000157835 87 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm23080-201ENSMUST00000157846 103 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col18a1P39061 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.36□□□□□ -1.87
Col18a1P39061 Gm22248-201ENSMUST00000082482 150 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm25142-201ENSMUST00000082698 107 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm23445-201ENSMUST00000082800 107 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Snord61-201ENSMUST00000083176 71 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm24453-201ENSMUST00000083346 76 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.36□□□□□ -1.87
Col18a1P39061 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col18a1P39061 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col18a1P39061 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col18a1P39061 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col18a1P39061 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col18a1P39061 Gm24907-201ENSMUST00000116932 128 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Gm22947-201ENSMUST00000158559 91 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Mir3087-201ENSMUST00000199405 56 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col18a1P39061 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col18a1P39061 Gm43473-201ENSMUST00000200442 5997 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col18a1P39061 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Col18a1P39061 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col18a1P39061 Gm26482-201ENSMUST00000158015 62 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Gm23196-201ENSMUST00000158806 107 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Gm23289-201ENSMUST00000175615 108 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Gm28755-201ENSMUST00000185773 199 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Snord21-201ENSMUST00000082519 94 ntBASIC3.35□□□□□ -1.87
Col18a1P39061 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
Col18a1P39061 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col18a1P39061 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.34□□□□□ -1.87
Col18a1P39061 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Gm12449-201ENSMUST00000117572 234 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Gm25269-201ENSMUST00000122601 104 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col18a1P39061 Gm23586-201ENSMUST00000157657 123 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Gm25464-201ENSMUST00000175481 107 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col18a1P39061 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Gm5175-202ENSMUST00000219699 529 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Gm24099-201ENSMUST00000083384 107 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.34□□□□□ -1.87
Col18a1P39061 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col18a1P39061 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.33□□□□□ -1.88
Col18a1P39061 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 782.4 ms