Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm28537-201ENSMUST00000189026 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm28861-201ENSMUST00000189681 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm28717-201ENSMUST00000189950 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm29180-201ENSMUST00000190003 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm29575-201ENSMUST00000190597 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm29631-201ENSMUST00000191065 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm28160-201ENSMUST00000191229 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm29469-201ENSMUST00000191448 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm37693-201ENSMUST00000194562 234 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm37129-201ENSMUST00000195791 315 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm5010-201ENSMUST00000213131 260 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm21937-201ENSMUST00000222825 218 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.16□□□□□ -2.22
Cldn9Q9Z0S7 Gm23435-201ENSMUST00000157183 156 ntBASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Gm23328-201ENSMUST00000157418 132 ntBASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Gm27711-201ENSMUST00000183802 118 ntBASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Mir7675-201ENSMUST00000184262 58 ntBASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Gm22980-201ENSMUST00000082608 70 ntBASIC1.15□□□□□ -2.23
Cldn9Q9Z0S7 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm26500-201ENSMUST00000101867 106 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Mir343-201ENSMUST00000102360 75 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm14296-202ENSMUST00000108931 750 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm22485-201ENSMUST00000157990 109 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm25161-201ENSMUST00000158913 132 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Mir3098-201ENSMUST00000175416 87 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Mir7063-201ENSMUST00000184158 91 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm29661-201ENSMUST00000186781 315 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm29308-201ENSMUST00000188863 315 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm28414-201ENSMUST00000190111 294 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm24624-201ENSMUST00000082617 164 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm25579-201ENSMUST00000083407 106 ntBASIC1.14□□□□□ -2.23
Cldn9Q9Z0S7 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Mir293-201ENSMUST00000104841 80 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm14923-201ENSMUST00000118270 155 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm28257-201ENSMUST00000185244 463 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm28409-201ENSMUST00000187064 103 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm24625-201ENSMUST00000082622 130 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm24037-201ENSMUST00000082871 180 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.13□□□□□ -2.23
Cldn9Q9Z0S7 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Mir1b-201ENSMUST00000117012 122 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm22281-201ENSMUST00000157198 103 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm22537-201ENSMUST00000158172 199 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm22663-201ENSMUST00000158721 102 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm23339-201ENSMUST00000158962 139 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm44010-201ENSMUST00000204432 331 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Gm23041-201ENSMUST00000083868 106 ntBASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Cldn9Q9Z0S7 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Mir544-201ENSMUST00000103813 78 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm15443-201ENSMUST00000118947 820 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm22113-201ENSMUST00000158343 104 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm24799-201ENSMUST00000178431 79 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm26180-201ENSMUST00000179942 107 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm17067-202ENSMUST00000180131 123 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm27539-201ENSMUST00000184971 224 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm20257-202ENSMUST00000188643 130 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Snord96a-201ENSMUST00000082791 81 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm25038-201ENSMUST00000082928 130 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm26164-201ENSMUST00000083793 104 ntBASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Cldn9Q9Z0S7 Gm22935-201ENSMUST00000103960 104 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm24915-201ENSMUST00000157288 78 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm22929-201ENSMUST00000175517 107 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm24618-201ENSMUST00000177718 94 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm23953-201ENSMUST00000178214 94 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm26332-201ENSMUST00000179813 94 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm22863-201ENSMUST00000180265 94 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm26200-201ENSMUST00000180273 79 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm27793-201ENSMUST00000183405 76 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Mir6346-201ENSMUST00000183982 81 ntBASIC1.1□□□□□ -2.23
Cldn9Q9Z0S7 Gm37918-201ENSMUST00000192071 120 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms