Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm43107-201ENSMUST00000198729 255 ntBASIC3.34□□□□□ -1.87
Trim56Q80VI1 Gm24148-201ENSMUST00000082762 80 ntBASIC3.34□□□□□ -1.87
Trim56Q80VI1 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim56Q80VI1 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim56Q80VI1 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 Gm11471-201ENSMUST00000121824 198 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 Gm23655-201ENSMUST00000122627 105 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 Gm22966-201ENSMUST00000157957 129 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 Gm37081-201ENSMUST00000192034 196 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 Gm22972-201ENSMUST00000083297 131 ntBASIC3.33□□□□□ -1.88
Trim56Q80VI1 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm22477-201ENSMUST00000122569 316 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm24879-201ENSMUST00000158386 143 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm27582-201ENSMUST00000184084 126 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Mir6917-201ENSMUST00000184111 61 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm44256-201ENSMUST00000203304 335 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm44526-201ENSMUST00000204664 121 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm22249-201ENSMUST00000082485 136 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trim56Q80VI1 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.32□□□□□ -1.88
Trim56Q80VI1 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim56Q80VI1 Mir693-201ENSMUST00000102187 89 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm24890-201ENSMUST00000104389 102 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm25500-201ENSMUST00000104426 123 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm11253-201ENSMUST00000118486 201 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm15733-201ENSMUST00000132957 242 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm25980-201ENSMUST00000157176 218 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm24911-201ENSMUST00000157292 136 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm24681-201ENSMUST00000158760 107 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim56Q80VI1 Mir28b-201ENSMUST00000175399 80 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm25528-201ENSMUST00000180264 132 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim56Q80VI1 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Gm22686-201ENSMUST00000082847 100 ntBASIC3.31□□□□□ -1.88
Trim56Q80VI1 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trim56Q80VI1 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim56Q80VI1 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim56Q80VI1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm13913-201ENSMUST00000121126 260 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm24141-201ENSMUST00000122776 115 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm26160-201ENSMUST00000158965 63 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm25464-201ENSMUST00000175481 107 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm25933-201ENSMUST00000178943 108 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Mir7014-201ENSMUST00000183853 63 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Mir7081-201ENSMUST00000184490 75 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm44425-201ENSMUST00000203739 429 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm23246-201ENSMUST00000083371 67 ntBASIC3.3□□□□□ -1.88
Trim56Q80VI1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim56Q80VI1 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim56Q80VI1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Gm25407-201ENSMUST00000104102 134 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Gm16111-201ENSMUST00000162128 285 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Gm28282-201ENSMUST00000186072 186 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Gm28409-201ENSMUST00000187064 103 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Gm37037-201ENSMUST00000194475 424 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
Trim56Q80VI1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.29□□□□□ -1.88
Trim56Q80VI1 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Trim56Q80VI1 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm13885-201ENSMUST00000117569 187 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm11285-201ENSMUST00000118443 322 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm20613-201ENSMUST00000175828 345 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm43587-201ENSMUST00000199590 204 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Gm25136-201ENSMUST00000083253 115 ntBASIC3.28□□□□□ -1.88
Trim56Q80VI1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Trim56Q80VI1 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.28□□□□□ -1.89
Trim56Q80VI1 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Trim56Q80VI1 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm15214-201ENSMUST00000122155 470 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm23260-201ENSMUST00000158317 172 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm45288-201ENSMUST00000210236 151 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm24616-201ENSMUST00000083274 139 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm22154-201ENSMUST00000083844 131 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm23947-201ENSMUST00000093636 107 ntBASIC3.27□□□□□ -1.89
Trim56Q80VI1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim56Q80VI1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim56Q80VI1 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim56Q80VI1 Mir374b-201ENSMUST00000102314 95 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm22850-201ENSMUST00000157714 82 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm23665-201ENSMUST00000158054 62 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm26215-201ENSMUST00000158584 139 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm24277-201ENSMUST00000158661 104 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm26435-201ENSMUST00000179026 107 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Mir7242-201ENSMUST00000183710 79 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Mir6916-201ENSMUST00000184514 63 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Mir3969-201ENSMUST00000197106 92 ntBASIC3.26□□□□□ -1.89
Trim56Q80VI1 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.26□□□□□ -1.89
Trim56Q80VI1 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms