Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mir28b-201ENSMUST00000175399 80 ntBASIC2.94□□□□□ -1.94
Sox9Q04887 Gm44938-201ENSMUST00000208614 427 ntBASIC2.94□□□□□ -1.94
Sox9Q04887 Gm18991-201ENSMUST00000209225 746 ntBASIC2.94□□□□□ -1.94
Sox9Q04887 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Sox9Q04887 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sox9Q04887 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Sox9Q04887 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sox9Q04887 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Sox9Q04887 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Sox9Q04887 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 DQ267100-201ENSMUST00000122600 72 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 Gm24440-201ENSMUST00000157236 63 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 Gm22551-201ENSMUST00000157795 103 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Sox9Q04887 Gm24512-201ENSMUST00000174963 65 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 Gm45445-201ENSMUST00000209586 232 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.93□□□□□ -1.94
Sox9Q04887 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.93□□□□□ -1.94
Sox9Q04887 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Sox9Q04887 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Sox9Q04887 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
Sox9Q04887 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm13588-201ENSMUST00000120026 135 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm16355-201ENSMUST00000128606 231 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm23230-201ENSMUST00000157298 133 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Mir5123-201ENSMUST00000177794 83 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm43676-201ENSMUST00000197532 540 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Mir721-201ENSMUST00000200230 88 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm6105-201ENSMUST00000200580 624 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm25634-201ENSMUST00000082667 105 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Gm24762-201ENSMUST00000083689 104 ntBASIC2.92□□□□□ -1.94
Sox9Q04887 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
Sox9Q04887 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Sox9Q04887 Gm26015-201ENSMUST00000104402 125 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm22193-201ENSMUST00000116868 76 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm12449-201ENSMUST00000117572 234 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm14602-201ENSMUST00000118625 340 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm15536-201ENSMUST00000121411 114 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm24443-201ENSMUST00000157242 132 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm24015-201ENSMUST00000157725 232 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Mir7242-201ENSMUST00000183710 79 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm33866-201ENSMUST00000196911 289 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm11351-202ENSMUST00000225724 478 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm22248-201ENSMUST00000082482 150 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.91□□□□□ -1.94
Sox9Q04887 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Sox9Q04887 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.9□□□□□ -1.94
Sox9Q04887 Gm23990-201ENSMUST00000117031 117 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Gm24291-201ENSMUST00000157633 162 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Gm24210-201ENSMUST00000158263 133 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Gm17161-201ENSMUST00000169187 524 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Mir669k-201ENSMUST00000177742 127 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Gm25673-201ENSMUST00000179957 127 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Gm24453-201ENSMUST00000083346 76 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Gm23246-201ENSMUST00000083371 67 ntBASIC2.9□□□□□ -1.95
Sox9Q04887 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Sox9Q04887 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox9Q04887 Mir499-201ENSMUST00000102357 79 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Gm14491-201ENSMUST00000121919 199 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Gm23048-201ENSMUST00000157237 129 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Gm23325-201ENSMUST00000157422 129 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox9Q04887 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.89□□□□□ -1.95
Sox9Q04887 Snord80-202ENSMUST00000199023 77 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.89□□□□□ -1.95
Sox9Q04887 Gm22421-201ENSMUST00000083058 107 ntBASIC2.89□□□□□ -1.95
Sox9Q04887 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Sox9Q04887 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox9Q04887 Gm25377-201ENSMUST00000104334 129 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm23803-201ENSMUST00000104610 132 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm9009-201ENSMUST00000117321 326 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm26105-201ENSMUST00000157253 190 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm23381-201ENSMUST00000157676 94 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox9Q04887 Gm22264-201ENSMUST00000178200 107 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm6801-201ENSMUST00000190697 339 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Mir1291-201ENSMUST00000199842 117 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm44564-201ENSMUST00000207985 180 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm25081-201ENSMUST00000082534 108 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm25813-201ENSMUST00000082748 191 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Snora34-201ENSMUST00000083402 138 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Gm25895-201ENSMUST00000083714 100 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox9Q04887 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox9Q04887 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.88□□□□□ -1.95
Sox9Q04887 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox9Q04887 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox9Q04887 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.87□□□□□ -1.95
Sox9Q04887 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Sox9Q04887 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.87□□□□□ -1.95
Sox9Q04887 Gm13885-201ENSMUST00000117569 187 ntBASIC2.87□□□□□ -1.95
Sox9Q04887 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.87□□□□□ -1.95
Sox9Q04887 Gm24896-201ENSMUST00000122741 135 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 173.5 ms