Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Trim56Q80VI1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm22193-201ENSMUST00000116868 76 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm11356-201ENSMUST00000118974 192 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm16021-201ENSMUST00000121176 219 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm23668-201ENSMUST00000157465 111 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm27700-201ENSMUST00000185003 81 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm43239-201ENSMUST00000200131 201 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.41□□□□□ -1.86
Trim56Q80VI1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Trim56Q80VI1 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.4□□□□□ -1.86
Trim56Q80VI1 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.4□□□□□ -1.86
Trim56Q80VI1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Trim56Q80VI1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Trim56Q80VI1 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trim56Q80VI1 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trim56Q80VI1 Gm6952-201ENSMUST00000118629 159 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Gm16533-201ENSMUST00000140035 228 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Gm23895-201ENSMUST00000158108 160 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Gm17117-201ENSMUST00000163665 299 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Snord93-201ENSMUST00000175580 71 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Gm44459-201ENSMUST00000203926 160 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.4□□□□□ -1.87
Trim56Q80VI1 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim56Q80VI1 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm23747-201ENSMUST00000104228 131 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm22678-201ENSMUST00000116974 101 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm6025-201ENSMUST00000121517 201 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm25280-201ENSMUST00000157269 101 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm22586-201ENSMUST00000157507 122 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm23182-201ENSMUST00000158688 135 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm44476-201ENSMUST00000196225 91 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Mir1291-201ENSMUST00000199842 117 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim56Q80VI1 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Snora34-201ENSMUST00000083402 138 ntBASIC3.39□□□□□ -1.87
Trim56Q80VI1 Gm24482-201ENSMUST00000117005 93 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm15272-201ENSMUST00000120865 233 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm22349-201ENSMUST00000157864 107 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm24054-201ENSMUST00000158619 105 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm23194-201ENSMUST00000158813 105 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm29308-201ENSMUST00000188863 315 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm28537-201ENSMUST00000189026 315 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm29631-201ENSMUST00000191065 315 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm42988-201ENSMUST00000198116 225 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim56Q80VI1 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Mir488-201ENSMUST00000093595 109 ntBASIC3.38□□□□□ -1.87
Trim56Q80VI1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
Trim56Q80VI1 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.37□□□□□ -1.87
Trim56Q80VI1 Gm25012-201ENSMUST00000158396 164 ntBASIC3.37□□□□□ -1.87
Trim56Q80VI1 Mir3106-201ENSMUST00000175401 82 ntBASIC3.37□□□□□ -1.87
Trim56Q80VI1 Gm15235-201ENSMUST00000200572 194 ntBASIC3.37□□□□□ -1.87
Trim56Q80VI1 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim56Q80VI1 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Trim56Q80VI1 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm23320-201ENSMUST00000104462 127 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 DQ267100-201ENSMUST00000122600 72 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm24443-201ENSMUST00000157242 132 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm23044-201ENSMUST00000157891 100 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm44024-201ENSMUST00000203008 476 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm23738-201ENSMUST00000082828 171 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm24977-201ENSMUST00000083106 163 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm26493-201ENSMUST00000083155 136 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.36□□□□□ -1.87
Trim56Q80VI1 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim56Q80VI1 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim56Q80VI1 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim56Q80VI1 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim56Q80VI1 Mir669b-201ENSMUST00000102172 97 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 Gm22373-201ENSMUST00000104584 89 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 Gm10025-201ENSMUST00000079568 372 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 Mir186-201ENSMUST00000083497 71 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 Gm23040-201ENSMUST00000083869 163 ntBASIC3.35□□□□□ -1.87
Trim56Q80VI1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim56Q80VI1 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Trim56Q80VI1 Gm24896-201ENSMUST00000122741 135 ntBASIC3.34□□□□□ -1.87
Trim56Q80VI1 Gm43521-201ENSMUST00000197838 255 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 139.4 ms