Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm14215-201ENSMUST00000120578 221 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm24598-201ENSMUST00000122510 74 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm22114-201ENSMUST00000177756 107 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm37713-201ENSMUST00000191746 198 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm25078-201ENSMUST00000082530 107 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm23055-201ENSMUST00000082805 94 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm24615-201ENSMUST00000083268 113 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Mir301b-201ENSMUST00000102333 97 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm24116-201ENSMUST00000103975 107 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm6954-201ENSMUST00000117416 225 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm15215-201ENSMUST00000117773 489 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm14588-201ENSMUST00000119895 172 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm24632-201ENSMUST00000122770 323 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm22447-201ENSMUST00000158155 92 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm28016-201ENSMUST00000184594 196 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm37763-201ENSMUST00000193445 120 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm6109-201ENSMUST00000223297 348 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm23731-201ENSMUST00000083749 107 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm12304-201ENSMUST00000120312 385 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm22221-201ENSMUST00000157362 103 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm23640-201ENSMUST00000157860 104 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm28169-201ENSMUST00000190342 345 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm42594-201ENSMUST00000199511 246 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Gm43914-201ENSMUST00000203592 594 ntBASIC1.88□□□□□ -2.11
Smchd1Q6P5D8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 Gm15213-201ENSMUST00000122098 216 ntBASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 Gm22027-201ENSMUST00000122737 127 ntBASIC1.87□□□□□ -2.11
Smchd1Q6P5D8 Gm12837-201ENSMUST00000120131 373 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm25543-201ENSMUST00000122678 312 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm22800-201ENSMUST00000175627 94 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm25457-201ENSMUST00000179509 107 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 BC022960-201ENSMUST00000119987 1815 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm14296-202ENSMUST00000108931 750 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm22113-201ENSMUST00000158343 104 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm22308-201ENSMUST00000177609 107 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm44960-201ENSMUST00000207403 141 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm45403-201ENSMUST00000209453 276 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm45616-201ENSMUST00000211711 319 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm22997-201ENSMUST00000082845 107 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Mir148b-201ENSMUST00000083626 97 ntBASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Smchd1Q6P5D8 Gm12785-201ENSMUST00000122052 172 ntBASIC1.85□□□□□ -2.11
Smchd1Q6P5D8 Gm22665-201ENSMUST00000158720 275 ntBASIC1.85□□□□□ -2.11
Smchd1Q6P5D8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
Smchd1Q6P5D8 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.85□□□□□ -2.11
Smchd1Q6P5D8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Smchd1Q6P5D8 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.85□□□□□ -2.11
Smchd1Q6P5D8 Gm26249-201ENSMUST00000116708 118 ntBASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Gm22281-201ENSMUST00000157198 103 ntBASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Gm23588-201ENSMUST00000157659 99 ntBASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Gm23190-201ENSMUST00000180307 64 ntBASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Gm29140-201ENSMUST00000190187 476 ntBASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Smchd1Q6P5D8 Gm27793-201ENSMUST00000183405 76 ntBASIC1.84□□□□□ -2.12
Smchd1Q6P5D8 Gm29665-201ENSMUST00000191457 528 ntBASIC1.84□□□□□ -2.12
Smchd1Q6P5D8 Gm19901-201ENSMUST00000192191 495 ntBASIC1.84□□□□□ -2.12
Smchd1Q6P5D8 Gm42774-201ENSMUST00000198854 283 ntBASIC1.84□□□□□ -2.12
Smchd1Q6P5D8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Smchd1Q6P5D8 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Smchd1Q6P5D8 Gm24984-201ENSMUST00000104454 133 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Snord11-201ENSMUST00000158468 84 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Mir7665-201ENSMUST00000184907 63 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Gm13967-201ENSMUST00000120404 380 ntBASIC1.83□□□□□ -2.12
Smchd1Q6P5D8 Gm25054-201ENSMUST00000157370 97 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms