Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22510-201ENSMUST00000179304 79 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm26336-201ENSMUST00000179449 79 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm26390-201ENSMUST00000179628 79 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col18a1P39061 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col18a1P39061 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col18a1P39061 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col18a1P39061 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Col18a1P39061 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col18a1P39061 Gm15760-201ENSMUST00000119553 283 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm11414-201ENSMUST00000121795 263 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm12013-201ENSMUST00000121971 155 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm12443-201ENSMUST00000122308 323 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.51□□□□□ -1.85
Col18a1P39061 Gm26195-201ENSMUST00000175035 101 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm25634-201ENSMUST00000082667 105 ntBASIC3.51□□□□□ -1.85
Col18a1P39061 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col18a1P39061 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Col18a1P39061 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col18a1P39061 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col18a1P39061 Gm13992-201ENSMUST00000120558 156 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm25150-201ENSMUST00000157121 60 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm25424-201ENSMUST00000157612 58 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm26084-201ENSMUST00000157903 104 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm22098-201ENSMUST00000157930 85 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm23312-201ENSMUST00000158774 102 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm23548-201ENSMUST00000158963 106 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm25950-201ENSMUST00000175331 100 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm43898-201ENSMUST00000204456 424 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm22454-201ENSMUST00000082583 107 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Gm22620-201ENSMUST00000082700 133 ntBASIC3.5□□□□□ -1.85
Col18a1P39061 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col18a1P39061 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.49□□□□□ -1.85
Col18a1P39061 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col18a1P39061 Gm13797-201ENSMUST00000121792 120 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.49□□□□□ -1.85
Col18a1P39061 Gm23331-201ENSMUST00000157423 108 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Gm25456-201ENSMUST00000157952 109 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col18a1P39061 Gm3851-201ENSMUST00000168653 318 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Mir3083-201ENSMUST00000175377 64 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Gm45317-201ENSMUST00000210385 223 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Gm22055-201ENSMUST00000083388 107 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
Col18a1P39061 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.49□□□□□ -1.85
Col18a1P39061 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col18a1P39061 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col18a1P39061 Gm5396-201ENSMUST00000121222 532 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm13560-201ENSMUST00000121865 329 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm22067-201ENSMUST00000122790 107 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm16355-201ENSMUST00000128606 231 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm25113-201ENSMUST00000157185 143 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm27786-201ENSMUST00000184337 70 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm44343-201ENSMUST00000196702 90 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm23650-201ENSMUST00000083355 70 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm26314-201ENSMUST00000083891 107 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col18a1P39061 Mir872-201ENSMUST00000104728 81 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm24839-201ENSMUST00000122602 107 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col18a1P39061 Gm21991-201ENSMUST00000180006 508 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm7726-201ENSMUST00000206241 231 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Gm24356-201ENSMUST00000082859 106 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Mir410-201ENSMUST00000083563 81 ntBASIC3.48□□□□□ -1.85
Col18a1P39061 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col18a1P39061 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Col18a1P39061 Gm25637-201ENSMUST00000157529 107 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 Gm22708-201ENSMUST00000158987 103 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 Gm43993-201ENSMUST00000203972 247 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 Gm5010-201ENSMUST00000213131 260 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 Gm24164-201ENSMUST00000093663 104 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.47□□□□□ -1.85
Col18a1P39061 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col18a1P39061 Gm11285-201ENSMUST00000118443 322 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm24053-201ENSMUST00000158620 105 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm24842-201ENSMUST00000158681 54 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm24177-201ENSMUST00000158927 131 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Mir5129-201ENSMUST00000174938 78 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm43676-201ENSMUST00000197532 540 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col18a1P39061 Mir497-201ENSMUST00000200557 84 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm45116-201ENSMUST00000207392 275 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col18a1P39061 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col18a1P39061 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col18a1P39061 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col18a1P39061 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col18a1P39061 Gm24951-201ENSMUST00000102182 109 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm12143-201ENSMUST00000119666 332 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Gm25060-201ENSMUST00000157374 130 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Mir6997-201ENSMUST00000184313 71 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.46□□□□□ -1.86
Col18a1P39061 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms