Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgn5Q9JL35 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Gm7514-201ENSMUST00000209475 934 ntBASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgn5Q9JL35 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgn5Q9JL35 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgn5Q9JL35 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgn5Q9JL35 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgn5Q9JL35 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgn5Q9JL35 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgn5Q9JL35 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hmgn5Q9JL35 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 814.8 ms