Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.81■□□□□ 0.44
Znf235Q61116 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf235Q61116 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Znf235Q61116 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Znf235Q61116 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Znf235Q61116 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.8■□□□□ 0.44
Znf235Q61116 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Znf235Q61116 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.8■□□□□ 0.44
Znf235Q61116 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf235Q61116 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Znf235Q61116 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Znf235Q61116 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.79■□□□□ 0.44
Znf235Q61116 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.79■□□□□ 0.44
Znf235Q61116 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Gm17807-201ENSMUST00000186869 298 ntBASIC17.79■□□□□ 0.44
Znf235Q61116 Gm18421-201ENSMUST00000204122 625 ntBASIC17.79■□□□□ 0.44
Znf235Q61116 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Znf235Q61116 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Znf235Q61116 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Znf235Q61116 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.78■□□□□ 0.44
Znf235Q61116 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.78■□□□□ 0.44
Znf235Q61116 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Znf235Q61116 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.78■□□□□ 0.44
Znf235Q61116 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Znf235Q61116 Gm29707-201ENSMUST00000196325 491 ntBASIC17.78■□□□□ 0.44
Znf235Q61116 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Znf235Q61116 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.77■□□□□ 0.44
Znf235Q61116 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.77■□□□□ 0.44
Znf235Q61116 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.77■□□□□ 0.44
Znf235Q61116 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf235Q61116 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Znf235Q61116 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.76■□□□□ 0.43
Znf235Q61116 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.76■□□□□ 0.43
Znf235Q61116 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Znf235Q61116 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.76■□□□□ 0.43
Znf235Q61116 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.76■□□□□ 0.43
Znf235Q61116 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.76■□□□□ 0.43
Znf235Q61116 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf235Q61116 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.75■□□□□ 0.43
Znf235Q61116 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Znf235Q61116 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.75■□□□□ 0.43
Znf235Q61116 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.75■□□□□ 0.43
Znf235Q61116 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 Gm18669-201ENSMUST00000216049 778 ntBASIC17.75■□□□□ 0.43
Znf235Q61116 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.75■□□□□ 0.43
Znf235Q61116 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Znf235Q61116 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms