Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NclP09405 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NclP09405 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC25.21■■□□□ 1.63
NclP09405 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Gm37722-201ENSMUST00000193757 208 ntBASIC25.21■■□□□ 1.63
NclP09405 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
NclP09405 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NclP09405 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
NclP09405 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC25.2■■□□□ 1.63
NclP09405 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
NclP09405 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NclP09405 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NclP09405 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NclP09405 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NclP09405 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
NclP09405 Gm27000-201ENSMUST00000182943 842 ntBASIC25.2■■□□□ 1.62
NclP09405 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NclP09405 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NclP09405 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
NclP09405 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Fcho2-208ENSMUST00000224992 2964 ntBASIC25.19■■□□□ 1.62
NclP09405 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
NclP09405 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC25.19■■□□□ 1.62
NclP09405 AC122351.1-201ENSMUST00000220467 126 ntBASIC25.19■■□□□ 1.62
NclP09405 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
NclP09405 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NclP09405 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC25.19■■□□□ 1.62
NclP09405 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
NclP09405 Gm9103-201ENSMUST00000119371 405 ntBASIC25.18■■□□□ 1.62
NclP09405 Gm11950-201ENSMUST00000121615 838 ntBASIC25.18■■□□□ 1.62
NclP09405 Gm11860-201ENSMUST00000122346 1010 ntBASIC25.18■■□□□ 1.62
NclP09405 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC25.18■■□□□ 1.62
NclP09405 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
NclP09405 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NclP09405 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NclP09405 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NclP09405 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NclP09405 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC25.17■■□□□ 1.62
NclP09405 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC25.17■■□□□ 1.62
NclP09405 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NclP09405 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
NclP09405 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NclP09405 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NclP09405 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NclP09405 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
NclP09405 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC25.16■■□□□ 1.62
NclP09405 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC25.16■■□□□ 1.62
NclP09405 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
NclP09405 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
NclP09405 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
NclP09405 Gm6623-201ENSMUST00000173570 544 ntBASIC25.15■■□□□ 1.62
NclP09405 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC25.15■■□□□ 1.62
NclP09405 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NclP09405 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC25.14■■□□□ 1.62
NclP09405 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC25.14■■□□□ 1.62
NclP09405 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NclP09405 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC25.14■■□□□ 1.62
NclP09405 AC130713.1-201ENSMUST00000228853 1096 ntBASIC25.14■■□□□ 1.62
NclP09405 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms