Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25204-201ENSMUST00000082843 106 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim56Q80VI1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim56Q80VI1 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim56Q80VI1 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim56Q80VI1 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm25466-201ENSMUST00000103995 132 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm23911-201ENSMUST00000104596 134 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm23325-201ENSMUST00000157422 129 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm23535-201ENSMUST00000157542 106 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm43676-201ENSMUST00000197532 540 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm43901-201ENSMUST00000203247 453 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm25814-201ENSMUST00000082754 107 ntBASIC3.47□□□□□ -1.85
Trim56Q80VI1 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim56Q80VI1 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim56Q80VI1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim56Q80VI1 Gm15282-201ENSMUST00000117707 300 ntBASIC3.46□□□□□ -1.86
Trim56Q80VI1 Gm23183-201ENSMUST00000122595 323 ntBASIC3.46□□□□□ -1.86
Trim56Q80VI1 Gm22557-201ENSMUST00000157804 102 ntBASIC3.46□□□□□ -1.86
Trim56Q80VI1 Gm44600-201ENSMUST00000208540 111 ntBASIC3.46□□□□□ -1.86
Trim56Q80VI1 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim56Q80VI1 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim56Q80VI1 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm15466-201ENSMUST00000122299 333 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm24627-201ENSMUST00000122764 138 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm23101-201ENSMUST00000157550 137 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Mir7k-201ENSMUST00000184115 110 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm44393-201ENSMUST00000197418 138 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm30534-201ENSMUST00000217928 207 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm26265-201ENSMUST00000083277 135 ntBASIC3.45□□□□□ -1.86
Trim56Q80VI1 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Trim56Q80VI1 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm23230-201ENSMUST00000157298 133 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm25059-201ENSMUST00000157367 117 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm22800-201ENSMUST00000175627 94 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm25020-201ENSMUST00000178071 107 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Mir21b-201ENSMUST00000184317 108 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm38311-201ENSMUST00000192945 165 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm37428-201ENSMUST00000193886 137 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm44338-201ENSMUST00000198614 110 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.44□□□□□ -1.86
Trim56Q80VI1 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm24705-201ENSMUST00000082808 107 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm23247-201ENSMUST00000083373 107 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Gm24929-201ENSMUST00000083403 139 ntBASIC3.44□□□□□ -1.86
Trim56Q80VI1 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Trim56Q80VI1 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim56Q80VI1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
Trim56Q80VI1 Snord89-201ENSMUST00000104516 110 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Mir1298-201ENSMUST00000116681 98 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm24480-201ENSMUST00000157442 103 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Mir1951-201ENSMUST00000157981 89 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm26403-201ENSMUST00000158500 105 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm26022-201ENSMUST00000158663 108 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm23337-201ENSMUST00000158959 118 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm29603-201ENSMUST00000186792 334 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm37281-201ENSMUST00000192412 439 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm37007-201ENSMUST00000194234 319 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm18502-201ENSMUST00000218679 199 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.43□□□□□ -1.86
Trim56Q80VI1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim56Q80VI1 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim56Q80VI1 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim56Q80VI1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm22141-201ENSMUST00000157403 277 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm22967-201ENSMUST00000157956 239 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm26405-201ENSMUST00000158495 100 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm22139-201ENSMUST00000158747 105 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm43991-201ENSMUST00000203751 274 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm11351-202ENSMUST00000225724 478 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm6030-201ENSMUST00000078768 402 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim56Q80VI1 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Trim56Q80VI1 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim56Q80VI1 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.42□□□□□ -1.86
Trim56Q80VI1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 158.7 ms