Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Smchd1Q6P5D8 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.94□□□□□ -2.1
Smchd1Q6P5D8 Gm22062-201ENSMUST00000082563 107 ntBASIC1.94□□□□□ -2.1
Smchd1Q6P5D8 Gm24460-201ENSMUST00000082731 106 ntBASIC1.94□□□□□ -2.1
Smchd1Q6P5D8 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.94□□□□□ -2.1
Smchd1Q6P5D8 Gm24590-201ENSMUST00000116699 119 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm14774-201ENSMUST00000117857 536 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm23120-201ENSMUST00000157654 287 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm28995-201ENSMUST00000186625 261 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm29167-201ENSMUST00000190024 377 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm44478-201ENSMUST00000204875 114 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm23041-201ENSMUST00000083868 106 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm23013-201ENSMUST00000104146 106 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm44655-201ENSMUST00000207768 423 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm9318-201ENSMUST00000222444 438 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm23970-201ENSMUST00000083319 107 ntBASIC1.93□□□□□ -2.1
Smchd1Q6P5D8 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm22761-201ENSMUST00000102278 96 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Mir374b-201ENSMUST00000102314 95 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm11798-201ENSMUST00000119150 421 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm23474-201ENSMUST00000158884 75 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm25397-201ENSMUST00000176951 92 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm25199-201ENSMUST00000083095 104 ntBASIC1.92□□□□□ -2.1
Smchd1Q6P5D8 Gm13714-201ENSMUST00000117313 221 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm25269-201ENSMUST00000122601 104 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm2830-201ENSMUST00000140330 385 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm23982-201ENSMUST00000157141 106 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm25888-201ENSMUST00000157778 302 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm26435-201ENSMUST00000179026 107 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm25450-201ENSMUST00000179144 107 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm43220-201ENSMUST00000199299 282 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm45207-201ENSMUST00000207469 145 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm45288-201ENSMUST00000210236 151 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm45673-201ENSMUST00000210293 358 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm26447-201ENSMUST00000082448 129 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm26126-201ENSMUST00000083188 164 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm26107-201ENSMUST00000083972 107 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm10222-201ENSMUST00000088336 294 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm24280-201ENSMUST00000104237 134 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm22149-201ENSMUST00000104442 136 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm14919-201ENSMUST00000120839 390 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm25805-201ENSMUST00000122788 108 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm23641-201ENSMUST00000157857 101 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm20613-201ENSMUST00000175828 345 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm5224-201ENSMUST00000183060 350 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm29005-201ENSMUST00000186773 320 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm44182-201ENSMUST00000204052 115 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Snora33-201ENSMUST00000093556 129 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Mir496a-201ENSMUST00000093627 79 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.91□□□□□ -2.1
Smchd1Q6P5D8 Gm8121-201ENSMUST00000153583 499 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm27396-201ENSMUST00000157708 58 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm24174-201ENSMUST00000158933 111 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm22448-201ENSMUST00000179254 107 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm25253-201ENSMUST00000179958 107 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Mir7039-201ENSMUST00000183852 85 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Mir6376-201ENSMUST00000185149 131 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm24625-201ENSMUST00000082622 130 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Mir29c-201ENSMUST00000083614 88 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Mir3968-201ENSMUST00000175355 100 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Gm24764-201ENSMUST00000083686 199 ntBASIC1.9□□□□□ -2.11
Smchd1Q6P5D8 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Smchd1Q6P5D8 Gm14001-201ENSMUST00000118847 247 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms