Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25966-201ENSMUST00000157169 117 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Gm24885-201ENSMUST00000158783 270 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Gm24308-201ENSMUST00000177773 114 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Mir6393-201ENSMUST00000183709 94 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Gm43324-201ENSMUST00000197482 289 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Gm25006-201ENSMUST00000083813 107 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col18a1P39061 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col18a1P39061 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col18a1P39061 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Col18a1P39061 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col18a1P39061 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm12640-201ENSMUST00000120097 310 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm26466-201ENSMUST00000179615 79 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm29604-201ENSMUST00000187176 163 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col18a1P39061 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.56□□□□□ -1.84
Col18a1P39061 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.56□□□□□ -1.84
Col18a1P39061 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col18a1P39061 mt-Tv-201ENSMUST00000082389 69 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Mir322-201ENSMUST00000083484 95 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Col18a1P39061 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Col18a1P39061 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Col18a1P39061 Mir147-201ENSMUST00000102354 79 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm23179-201ENSMUST00000158693 304 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm25253-201ENSMUST00000179958 107 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm43220-201ENSMUST00000199299 282 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Gm44477-201ENSMUST00000199661 110 ntBASIC3.56□□□□□ -1.84
Col18a1P39061 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col18a1P39061 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col18a1P39061 Gm22051-201ENSMUST00000117002 127 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm11429-201ENSMUST00000119089 144 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm25805-201ENSMUST00000122788 108 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.55□□□□□ -1.84
Col18a1P39061 Gm24601-201ENSMUST00000157970 143 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm22729-201ENSMUST00000158088 129 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm24634-201ENSMUST00000158672 107 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Mir6335-201ENSMUST00000184081 98 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm27648-201ENSMUST00000184315 107 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.55□□□□□ -1.84
Col18a1P39061 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col18a1P39061 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col18a1P39061 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col18a1P39061 Mir767-201ENSMUST00000103256 107 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col18a1P39061 Gm25623-201ENSMUST00000157216 108 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Gm27365-201ENSMUST00000184041 177 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Gm29429-201ENSMUST00000187071 121 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Gm42774-201ENSMUST00000198854 283 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Gm25636-201ENSMUST00000082666 133 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Gm23462-201ENSMUST00000083264 104 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.54□□□□□ -1.84
Col18a1P39061 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Col18a1P39061 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Col18a1P39061 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Col18a1P39061 Gm12304-201ENSMUST00000120312 385 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.53□□□□□ -1.84
Col18a1P39061 Gm23932-201ENSMUST00000082914 107 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col18a1P39061 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col18a1P39061 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col18a1P39061 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col18a1P39061 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col18a1P39061 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col18a1P39061 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Mir7017-201ENSMUST00000184894 62 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.53□□□□□ -1.84
Col18a1P39061 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 AC126939.3-201ENSMUST00000226061 166 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Gm7117-201ENSMUST00000071515 387 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Gm25896-201ENSMUST00000083713 136 ntBASIC3.53□□□□□ -1.84
Col18a1P39061 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col18a1P39061 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
Col18a1P39061 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col18a1P39061 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Mir592-201ENSMUST00000102113 96 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Mir344e-201ENSMUST00000104677 66 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm14448-201ENSMUST00000116383 210 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm25267-201ENSMUST00000158522 63 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Mir6418-201ENSMUST00000185075 115 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm29613-201ENSMUST00000185846 313 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm29544-201ENSMUST00000188860 313 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm28808-201ENSMUST00000190978 313 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm28872-201ENSMUST00000191518 158 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm44324-201ENSMUST00000198517 135 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm24966-201ENSMUST00000082443 79 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Gm25581-201ENSMUST00000083410 164 ntBASIC3.52□□□□□ -1.85
Col18a1P39061 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col18a1P39061 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
Col18a1P39061 Gm23184-201ENSMUST00000122594 131 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms