Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Mir450b-201ENSMUST00000102095 82 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm22488-201ENSMUST00000116811 127 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm25323-201ENSMUST00000122555 103 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm24894-201ENSMUST00000122744 118 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm25393-201ENSMUST00000157336 285 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm23112-201ENSMUST00000158606 125 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm23152-201ENSMUST00000175322 116 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm44358-201ENSMUST00000196301 98 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Pcdhb7Q8CDY9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Gm22845-201ENSMUST00000157712 104 ntBASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Gm22708-201ENSMUST00000158987 103 ntBASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdhb7Q8CDY9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm24727-201ENSMUST00000158231 144 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm24930-201ENSMUST00000158315 83 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm20693-201ENSMUST00000177431 211 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Mir713-201ENSMUST00000178651 108 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Mir6975-201ENSMUST00000184879 61 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Gm8219-201ENSMUST00000218309 242 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdhb7Q8CDY9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pcdhb7Q8CDY9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm13885-201ENSMUST00000117569 187 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm11356-201ENSMUST00000118974 192 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm26091-201ENSMUST00000122704 82 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm23599-201ENSMUST00000157261 251 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm25888-201ENSMUST00000157778 302 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm22120-201ENSMUST00000175590 70 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm37377-201ENSMUST00000191733 304 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm37343-201ENSMUST00000192542 111 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm26126-201ENSMUST00000083188 164 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Mir369-201ENSMUST00000083627 79 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdhb7Q8CDY9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Gm12213-201ENSMUST00000119924 353 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Gm10357-201ENSMUST00000159886 264 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Gm24811-201ENSMUST00000175313 100 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Gm29408-201ENSMUST00000187536 216 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Gm37698-201ENSMUST00000192605 463 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.64□□□□□ -1.83
Pcdhb7Q8CDY9 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm24650-201ENSMUST00000157105 103 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm22558-201ENSMUST00000157326 95 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm22221-201ENSMUST00000157362 103 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm20438-201ENSMUST00000174441 329 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Mir669j-201ENSMUST00000179023 121 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm37290-201ENSMUST00000195775 339 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm44476-201ENSMUST00000196225 91 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Mir129b-201ENSMUST00000197461 65 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm44824-201ENSMUST00000207021 229 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.63□□□□□ -1.83
Pcdhb7Q8CDY9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Pcdhb7Q8CDY9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Pcdhb7Q8CDY9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Pcdhb7Q8CDY9 Gm14567-201ENSMUST00000117155 174 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 211 ms