Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim56Q80VI1 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Mir499-201ENSMUST00000102357 79 ntBASIC3.53□□□□□ -1.84
Trim56Q80VI1 Gm25376-201ENSMUST00000104340 133 ntBASIC3.53□□□□□ -1.84
Trim56Q80VI1 Gm25539-201ENSMUST00000116886 122 ntBASIC3.53□□□□□ -1.84
Trim56Q80VI1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Gm22075-201ENSMUST00000158599 192 ntBASIC3.53□□□□□ -1.84
Trim56Q80VI1 Gm25490-201ENSMUST00000158734 130 ntBASIC3.53□□□□□ -1.84
Trim56Q80VI1 Gm34139-201ENSMUST00000196166 294 ntBASIC3.53□□□□□ -1.84
Trim56Q80VI1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim56Q80VI1 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm22270-201ENSMUST00000104034 132 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm24787-201ENSMUST00000157380 123 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm22483-201ENSMUST00000157986 274 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm22699-201ENSMUST00000175376 105 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm4479-201ENSMUST00000178807 171 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm28992-201ENSMUST00000190534 139 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm24350-202ENSMUST00000198309 132 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.52□□□□□ -1.85
Trim56Q80VI1 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Trim56Q80VI1 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim56Q80VI1 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim56Q80VI1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim56Q80VI1 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm22281-201ENSMUST00000157198 103 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm22553-201ENSMUST00000157797 295 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm26482-201ENSMUST00000158015 62 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm22382-201ENSMUST00000158185 130 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Mir1936-201ENSMUST00000158699 93 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm16162-201ENSMUST00000162296 297 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm17161-201ENSMUST00000169187 524 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm25457-201ENSMUST00000179509 107 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm44564-201ENSMUST00000207985 180 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm25589-201ENSMUST00000082502 166 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm23615-201ENSMUST00000082602 65 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm10351-201ENSMUST00000087694 125 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.51□□□□□ -1.85
Trim56Q80VI1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.5□□□□□ -1.85
Trim56Q80VI1 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trim56Q80VI1 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim56Q80VI1 Gm11598-201ENSMUST00000119257 357 ntBASIC3.5□□□□□ -1.85
Trim56Q80VI1 Gm14491-201ENSMUST00000121919 199 ntBASIC3.5□□□□□ -1.85
Trim56Q80VI1 Gm16546-201ENSMUST00000159442 355 ntBASIC3.5□□□□□ -1.85
Trim56Q80VI1 Gm46233-201ENSMUST00000217831 449 ntBASIC3.5□□□□□ -1.85
Trim56Q80VI1 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim56Q80VI1 AF357341-201ENSMUST00000083088 75 ntBASIC3.5□□□□□ -1.85
Trim56Q80VI1 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm26293-201ENSMUST00000104170 84 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm22148-201ENSMUST00000104445 107 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm3788-201ENSMUST00000119949 136 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm15365-201ENSMUST00000122392 300 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm22961-201ENSMUST00000157964 106 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Mir6402-201ENSMUST00000183406 80 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim56Q80VI1 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim56Q80VI1 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim56Q80VI1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim56Q80VI1 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim56Q80VI1 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim56Q80VI1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Gm13922-201ENSMUST00000119505 156 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Gm23716-201ENSMUST00000157348 144 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Mir6993-201ENSMUST00000184912 65 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 Gm5010-201ENSMUST00000213131 260 ntBASIC3.48□□□□□ -1.85
Trim56Q80VI1 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 154 ms