Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Sox9Q04887 Gm12513-201ENSMUST00000118617 352 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm12858-201ENSMUST00000121913 208 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm25280-201ENSMUST00000157269 101 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm7592-201ENSMUST00000160674 627 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm7582-201ENSMUST00000160831 603 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm6788-201ENSMUST00000166459 270 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm18486-201ENSMUST00000184040 298 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm27648-201ENSMUST00000184315 107 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm28900-201ENSMUST00000185232 156 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.11□□□□□ -1.91
Sox9Q04887 Gm28647-201ENSMUST00000188416 197 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm38311-201ENSMUST00000192945 165 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm25820-202ENSMUST00000197479 128 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm43427-201ENSMUST00000198188 331 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm44563-201ENSMUST00000207958 178 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Gm26204-201ENSMUST00000082906 107 ntBASIC3.11□□□□□ -1.91
Sox9Q04887 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Sox9Q04887 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sox9Q04887 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sox9Q04887 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Sox9Q04887 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sox9Q04887 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Sox9Q04887 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Sox9Q04887 Gm23492-201ENSMUST00000116837 115 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm22713-201ENSMUST00000116895 130 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm12723-201ENSMUST00000120700 451 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.1□□□□□ -1.91
Sox9Q04887 Gm22337-201ENSMUST00000157721 132 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm24388-201ENSMUST00000177872 107 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.1□□□□□ -1.91
Sox9Q04887 Trbv18-201ENSMUST00000194256 294 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm26265-202ENSMUST00000196326 133 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm45778-201ENSMUST00000211959 153 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm18617-201ENSMUST00000222311 259 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Gm24355-201ENSMUST00000082858 122 ntBASIC3.1□□□□□ -1.91
Sox9Q04887 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sox9Q04887 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Sox9Q04887 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sox9Q04887 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Sox9Q04887 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Sox9Q04887 Gm24132-201ENSMUST00000104745 91 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Gm25529-201ENSMUST00000104850 92 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Gm25051-201ENSMUST00000158602 249 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Mir8096-201ENSMUST00000184526 127 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Gm37997-201ENSMUST00000193515 267 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Gm37037-201ENSMUST00000194475 424 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Sox9Q04887 Gm24698-201ENSMUST00000083883 130 ntBASIC3.09□□□□□ -1.91
Sox9Q04887 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
Sox9Q04887 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Sox9Q04887 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Sox9Q04887 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Sox9Q04887 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Sox9Q04887 Gm23128-201ENSMUST00000104257 132 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Gm24274-201ENSMUST00000116787 124 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Gm12550-201ENSMUST00000118478 329 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Gm12351-201ENSMUST00000118727 292 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Mir3106-201ENSMUST00000175401 82 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Gm23571-201ENSMUST00000180073 127 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Gm23128-202ENSMUST00000196578 133 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.08□□□□□ -1.92
Sox9Q04887 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sox9Q04887 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.08□□□□□ -1.92
Sox9Q04887 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Sox9Q04887 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Sox9Q04887 Gm6954-201ENSMUST00000117416 225 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm11786-201ENSMUST00000120799 155 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm25625-201ENSMUST00000157221 96 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm24911-201ENSMUST00000157292 136 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm23536-201ENSMUST00000157541 134 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm25935-201ENSMUST00000178746 107 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm27585-201ENSMUST00000183717 199 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.07□□□□□ -1.92
Sox9Q04887 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.07□□□□□ -1.92
Sox9Q04887 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.07□□□□□ -1.92
Sox9Q04887 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.07□□□□□ -1.92
Sox9Q04887 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Sox9Q04887 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Sox9Q04887 Gm24890-201ENSMUST00000104389 102 ntBASIC3.06□□□□□ -1.92
Sox9Q04887 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Sox9Q04887 Gm12213-201ENSMUST00000119924 353 ntBASIC3.06□□□□□ -1.92
Sox9Q04887 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 175.1 ms