Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.63□□□□□ -1.83
Col18a1P39061 Mir369-201ENSMUST00000083627 79 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm25895-201ENSMUST00000083714 100 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Mir488-201ENSMUST00000093595 109 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.63□□□□□ -1.83
Col18a1P39061 Gm37602-201ENSMUST00000195187 3310 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Col18a1P39061 Gm13922-201ENSMUST00000119505 156 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm22515-201ENSMUST00000158273 305 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Mir3969-201ENSMUST00000197106 92 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Gm22827-201ENSMUST00000083766 107 ntBASIC3.63□□□□□ -1.83
Col18a1P39061 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.63□□□□□ -1.83
Col18a1P39061 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col18a1P39061 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col18a1P39061 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Col18a1P39061 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col18a1P39061 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
Col18a1P39061 Gm20438-201ENSMUST00000174441 329 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Mir6406-201ENSMUST00000183592 120 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Gm27761-201ENSMUST00000184091 131 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Mir3569-201ENSMUST00000185080 58 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Gm44376-201ENSMUST00000197570 128 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Gm23244-201ENSMUST00000083375 92 ntBASIC3.62□□□□□ -1.83
Col18a1P39061 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Col18a1P39061 Gm22803-201ENSMUST00000158049 283 ntBASIC3.61□□□□□ -1.83
Col18a1P39061 Gm27233-201ENSMUST00000184030 307 ntBASIC3.61□□□□□ -1.83
Col18a1P39061 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col18a1P39061 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col18a1P39061 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col18a1P39061 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col18a1P39061 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col18a1P39061 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col18a1P39061 Snora36b-201ENSMUST00000104383 132 ntBASIC3.61□□□□□ -1.83
Col18a1P39061 Snord90-201ENSMUST00000104568 111 ntBASIC3.61□□□□□ -1.83
Col18a1P39061 Gm24946-201ENSMUST00000158332 106 ntBASIC3.61□□□□□ -1.83
Col18a1P39061 CT571266.1-201ENSMUST00000222859 153 ntBASIC3.61□□□□□ -1.83
Col18a1P39061 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col18a1P39061 AC133934.2-201ENSMUST00000221729 4129 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col18a1P39061 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col18a1P39061 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col18a1P39061 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Snord64-201ENSMUST00000104003 67 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Gm15069-201ENSMUST00000117792 192 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Gm15068-201ENSMUST00000119796 192 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Gm14782-201ENSMUST00000120151 195 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Gm22558-201ENSMUST00000157326 95 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Gm24461-201ENSMUST00000082735 103 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col18a1P39061 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col18a1P39061 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.6□□□□□ -1.83
Col18a1P39061 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col18a1P39061 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col18a1P39061 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col18a1P39061 Mir667-201ENSMUST00000102441 92 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm26049-201ENSMUST00000157313 108 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm22215-201ENSMUST00000157558 96 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm22557-201ENSMUST00000157804 102 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm23303-201ENSMUST00000082714 152 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm22806-201ENSMUST00000082738 136 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm24929-201ENSMUST00000083403 139 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm22353-201ENSMUST00000083918 136 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.59□□□□□ -1.83
Col18a1P39061 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col18a1P39061 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.58□□□□□ -1.84
Col18a1P39061 Gm25621-201ENSMUST00000157223 114 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm27245-201ENSMUST00000184385 376 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Mir7657-201ENSMUST00000196051 57 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm8274-201ENSMUST00000219820 463 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col18a1P39061 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col18a1P39061 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col18a1P39061 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col18a1P39061 Gm6952-201ENSMUST00000118629 159 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm16186-201ENSMUST00000120132 216 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm11785-201ENSMUST00000120165 601 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm14551-201ENSMUST00000120802 256 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm23670-201ENSMUST00000157469 119 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm23752-201ENSMUST00000157584 115 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm6651-201ENSMUST00000189471 271 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.58□□□□□ -1.84
Col18a1P39061 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm43199-201ENSMUST00000200019 307 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm22061-201ENSMUST00000082557 107 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.58□□□□□ -1.84
Col18a1P39061 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col18a1P39061 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col18a1P39061 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.57□□□□□ -1.84
Col18a1P39061 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col18a1P39061 Gm22496-201ENSMUST00000104493 88 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms