Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Mir1291-201ENSMUST00000199842 117 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Gm33654-201ENSMUST00000221704 215 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Gm21937-201ENSMUST00000222825 218 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Gm22972-201ENSMUST00000083297 131 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Snora34-201ENSMUST00000083402 138 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Gm26314-201ENSMUST00000083891 107 ntBASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Lrif1Q8CDD9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm11512-201ENSMUST00000119669 663 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm25543-201ENSMUST00000122678 312 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm24076-201ENSMUST00000158179 94 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm22435-201ENSMUST00000158552 128 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Mir6346-201ENSMUST00000183982 81 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.6□□□□□ -2.15
Lrif1Q8CDD9 Gm25938-201ENSMUST00000104139 166 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm26249-201ENSMUST00000116708 118 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm22556-201ENSMUST00000157803 100 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm16038-201ENSMUST00000159317 193 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm23289-201ENSMUST00000175615 108 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm22510-201ENSMUST00000179304 79 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm26336-201ENSMUST00000179449 79 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm26390-201ENSMUST00000179628 79 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm27898-201ENSMUST00000183987 80 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm45704-201ENSMUST00000212582 403 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.59□□□□□ -2.15
Lrif1Q8CDD9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm14674-201ENSMUST00000117816 342 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm11359-201ENSMUST00000120039 567 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm22221-201ENSMUST00000157362 103 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm22217-201ENSMUST00000157556 313 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm17100-201ENSMUST00000168963 272 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm24810-201ENSMUST00000175317 70 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm23660-201ENSMUST00000178362 79 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm24088-201ENSMUST00000179100 79 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm26180-201ENSMUST00000179942 107 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm28927-201ENSMUST00000191528 272 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm37337-201ENSMUST00000192601 993 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Gm18546-201ENSMUST00000197245 676 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Lrif1Q8CDD9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm22193-201ENSMUST00000116868 76 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm13729-201ENSMUST00000120328 406 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Snord87-201ENSMUST00000175437 87 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm22263-201ENSMUST00000180060 104 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 Gm10360-201ENSMUST00000097219 272 ntBASIC1.57□□□□□ -2.16
Lrif1Q8CDD9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Mir374b-201ENSMUST00000102314 95 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm22113-201ENSMUST00000158343 104 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm20462-201ENSMUST00000172623 408 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.56□□□□□ -2.16
Lrif1Q8CDD9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms