Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm12412-201ENSMUST00000121867 328 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm24388-201ENSMUST00000177872 107 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Snord50b-201ENSMUST00000178497 72 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm42834-201ENSMUST00000196845 256 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim56Q80VI1 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm25812-201ENSMUST00000082751 103 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.6□□□□□ -1.83
Trim56Q80VI1 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim56Q80VI1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim56Q80VI1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim56Q80VI1 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim56Q80VI1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim56Q80VI1 Gm22051-201ENSMUST00000117002 127 ntBASIC3.59□□□□□ -1.83
Trim56Q80VI1 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim56Q80VI1 Gm26337-201ENSMUST00000178000 79 ntBASIC3.59□□□□□ -1.83
Trim56Q80VI1 Gm45116-201ENSMUST00000207392 275 ntBASIC3.59□□□□□ -1.83
Trim56Q80VI1 Gm22421-201ENSMUST00000083058 107 ntBASIC3.59□□□□□ -1.83
Trim56Q80VI1 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm24283-201ENSMUST00000104233 107 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm12143-201ENSMUST00000119666 332 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm12723-201ENSMUST00000120700 451 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm13443-201ENSMUST00000120770 555 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm12926-201ENSMUST00000121158 409 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm25267-201ENSMUST00000158522 63 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm25253-201ENSMUST00000179958 107 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm28344-201ENSMUST00000185704 279 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 AL627387.1-201ENSMUST00000226063 250 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Gm22248-201ENSMUST00000082482 150 ntBASIC3.58□□□□□ -1.84
Trim56Q80VI1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim56Q80VI1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm24440-201ENSMUST00000157236 63 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm24908-201ENSMUST00000157294 127 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm24512-201ENSMUST00000174963 65 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm29553-201ENSMUST00000189692 279 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm23722-201ENSMUST00000083002 130 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm23138-201ENSMUST00000083365 103 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.57□□□□□ -1.84
Trim56Q80VI1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim56Q80VI1 Mir291a-201ENSMUST00000104815 82 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 Gm15861-201ENSMUST00000120979 339 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 Gm25961-201ENSMUST00000157174 135 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 Gm24138-201ENSMUST00000157572 114 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 Gm22384-201ENSMUST00000158187 104 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 Gm6003-201ENSMUST00000187903 463 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 AF357428-201ENSMUST00000083815 69 ntBASIC3.56□□□□□ -1.84
Trim56Q80VI1 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim56Q80VI1 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm14448-201ENSMUST00000116383 210 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm25625-201ENSMUST00000157221 96 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm23380-201ENSMUST00000158448 103 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm23922-201ENSMUST00000178792 79 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm24657-201ENSMUST00000180085 79 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm22996-201ENSMUST00000180236 79 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm43993-201ENSMUST00000203972 247 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm25142-201ENSMUST00000082698 107 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Gm24410-201ENSMUST00000083433 107 ntBASIC3.55□□□□□ -1.84
Trim56Q80VI1 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Trim56Q80VI1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm22939-201ENSMUST00000103958 131 ntBASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm23651-201ENSMUST00000116755 120 ntBASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm13801-201ENSMUST00000120750 160 ntBASIC3.54□□□□□ -1.84
Trim56Q80VI1 Mir5123-201ENSMUST00000177794 83 ntBASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm37918-201ENSMUST00000192071 120 ntBASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm44481-201ENSMUST00000197288 84 ntBASIC3.54□□□□□ -1.84
Trim56Q80VI1 Gm44339-201ENSMUST00000200598 84 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms